| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3216 |
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| Symbol | |
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| ID | 4921574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3835437 |
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| End bp | 3836336 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164826 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095341 |
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| Protein GI | 127514144 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTT GCCGACAGGA GGTAACCATG GACAAGGTGT TTATTATTTC CCAGAAAGCC
GAGCAGCAGG CCGATGCCAT TGAGACGGGG ATCGCCTTGG CCAGGGTATT GGAGAAGGAG
GCAGAGGTGT TTGCCTACAG CTACGAATCC TTTGCGGGTA AGGAGTACTA CAATCCCAGG
CTGGGTGCGG CGGCCAAGGT GGCCCTGATG AATCAGCGCA GCGAGGAGAT CGCCGCCAAG
CTTAAGGCGC TCAAGGCGGA AGACGTGGCC GTGCATAGCG TGTGGACCAA AGATCTGTTC
GAACATGCCT GTCATCACTC CATTCGTCAT GGGTTCGACC TCATGGTTAA GGCGGTGCAT
CACAAGACTC ACTATCTGCC GATGGACTGG CAGCTGATCC GCCATGTGCG CATCCCGTTG
ATGATGCTGT GCGACAACCC CTTGCAGCGT GCCCGCAGCG TGTTGATGGC GGTGGATCTG
GGCAGCGACA ACCCCATCAA ACAGAAACTC AACCAGTGCG TCATTCAACA GGGTCGCCAG
CTGGCAGAGG CGATGGACTG CCAGCTACAT CTGGCCTACA TCATACGCGT GCCTAAGATC
TTAAGAGATA TGGACCTTAT CGACACCCGC ACCCTAGTGA AGGACGCCTA TCACAGGTAT
CAGCCTCAGC TGGACGAGAT TGACCTGCAT CAGGAGCATG TACATTTCCT GGCGGGCGAT
CCCGATCTTT GCCTCTACGA GCTCTCCTGT CGCCTCAAGG CCGCCTATCT GGTGATGGGC
GCTCGCCAAC GCAAGGGGCT GATGGGCATG GTCATAGGCA ATACCGCCGA GGCCATGTTG
ACCCGCATCC GCAGCAATGT GTTGATTATT CCAGCTGACG ATCAGCTGTT GCCTGCCTAA
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| Protein sequence | METCRQEVTM DKVFIISQKA EQQADAIETG IALARVLEKE AEVFAYSYES FAGKEYYNPR
LGAAAKVALM NQRSEEIAAK LKALKAEDVA VHSVWTKDLF EHACHHSIRH GFDLMVKAVH
HKTHYLPMDW QLIRHVRIPL MMLCDNPLQR ARSVLMAVDL GSDNPIKQKL NQCVIQQGRQ
LAEAMDCQLH LAYIIRVPKI LRDMDLIDTR TLVKDAYHRY QPQLDEIDLH QEHVHFLAGD
PDLCLYELSC RLKAAYLVMG ARQRKGLMGM VIGNTAEAML TRIRSNVLII PADDQLLPA
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