| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3201 |
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| Symbol | |
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| ID | 4921591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3817906 |
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| End bp | 3818571 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164811 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001095326 |
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| Protein GI | 127514129 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTG TCGCGACCCT GAGCGAGATC TCAAAGGGCT TTAACGACGG CGATAAGTTT
CATCTTGTGC TGGACAGGCT CGACCTAGAG CTCGCCCTCG GCGAGACGGT TGCCCTCACC
GGCCCGAGCG GAAGCGGCAA GAGCACGCTA CTCAATATCA TCGCAGGATT CGAGCGCCCC
AGCAGTGGCG CCCTCACCCT ATTAACCCAA GATACCCGAA CCTGGGACGA CAGCCGCTGG
AGCCAGTTCA GACACCACCA ACTAGGCGTC GTCTTCCAGC AATTTAACCT GCTCACCCCG
CTCAATGTCG AAGACAACAT CGCCTTTCCC CTGCATCTGC AGGGAGACGG CTGGAACGCC
TGGTGCGATC ACCTGGTCGA CGCACTCGGG CTAAGGCCCC TGCTCAAGCG TCACGTGGAG
GCCTTGTCTG GCGGTCAACA GCAAAGGGTG GCCATCGCCC GGGCCCTGGC CCACAAGCCA
GCATTATTGC TGGCGGACGA ACCCACGGGC AACCTGGATC AGACCACTAG CCTGGAGGTG
ATGGCGCTTA TCTGCGACTT GGCCGCCGAG CACGACACCA GCATCTTAAT GGTGACCCAC
TCCATGGAGT GCGCCGCCTT CATGCAGCGC CGCTGGCACC TGGATCTTGG TCGGGTGCAT
GAGTAG
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| Protein sequence | MTSVATLSEI SKGFNDGDKF HLVLDRLDLE LALGETVALT GPSGSGKSTL LNIIAGFERP
SSGALTLLTQ DTRTWDDSRW SQFRHHQLGV VFQQFNLLTP LNVEDNIAFP LHLQGDGWNA
WCDHLVDALG LRPLLKRHVE ALSGGQQQRV AIARALAHKP ALLLADEPTG NLDQTTSLEV
MALICDLAAE HDTSILMVTH SMECAAFMQR RWHLDLGRVH E
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