| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3190 |
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| Symbol | |
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| ID | 4921580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3798656 |
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| End bp | 3800116 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164800 |
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| Product | catalase |
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| Protein accession | YP_001095315 |
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| Protein GI | 127514118 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0631825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.81248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA ACTACTTAAC CAGCCAAAAT GGCGCACCTA TTGCGGACGA TCAAAACTCT
CTCTCTGCCG GCGAGCGCGG CCCGCTACTG CTACAGGACT GGCACCTTAT CGAGAAGCTG
GCGCACTTTA ACCGTGAGCG TATTCCCGAG CGTATCGTCC ACGCCAAGGG CACGGGGGTG
TATGGCACCT TCACCCTGAC CAAAGATTTG AGCGACTATA CCATCGCCGA CCACTTCAAC
GGCGAAGGCA AGCAGACGGA GACCTTCGTG CGCTTCTCGA CCGTGGGCGG CGAGATGGGT
TCGGCCGACG CCGAGCGCGA TCCCCGTGGT TTTGGTCTGC GTTTCTACAC CAAGCGCGGT
AACCACGATA TCGTCGGTAA CAACACCCCG ACCTTCTTCC TGCGTGATGG CATCAAGTTC
CCGGACTTCA TCCACACCCA GAAGCGCAAC CCTATGACTA ACCTGAAAGA TCCACAGGCG
ATGTGGGACT TCTGGTCGCT TAACCCTGAG GCGATGCATC AGGTCACCAT CTTGATGTCA
GACCGTGGTA TTCCGGCTAA CTATCGTCAG ATGCACGGCT ACGGCTCGCA CACCTTCTCC
TTCTGGAATG CCAAGGGAGA ACGTTTCTGG GTCAAGTTCC ACTTCAAGTC ACAGCAGGGC
GTGGTTAACC TGACCAACGA GCAGGCGGAC AAGCTTAAGG GGATCGATCC CGACTCGTCA
CAGCGTGACA TGGTGGCGGC TATCCAGGAC GCTAACTTCC CGCGCTGGAC GGTGAATGTG
CAGATCATGC CTGAGGCCGA TGCCAACACC TATCACATCA ACCCGTTCGA TCTGACCAAG
GTGTGGCCAC ATGGCGACTA CCCGCTGATC GAGATAGGCG TGCTAGAGCT TAACCGTCTG
CCGCAGAACT ACTTCGCCGA GGTGGAGCAG GTGGCCTTAG CCCCGAGTAA CCTAGTGCCA
GGCGTAGGCG CCTCGCCGGA CAAGATGTTG CAGGCGCGTC TGTTTGCCTA TGCCGATGCC
CAGCGCTACC GTATCGGCGC CAACTATAAC CAGTTGCCGG TAAACTGCCC TCATGCGACT
CAGGCAAACC ATCATCAGCG TGGCGGCGCC ATGGCGGGAA CCCAGTGCCC CTTCAGCGGC
AGTCAGACGG GCGGCGATGC CAGCGCCAAC TATGGGCCGA ACAGCACTCA GTCTGCCCTG
GTGGAGCCGA CACAGTTTGC AGAACCAGCG CTGAGACTCG ATGGTGAAGC CGACCGTTAC
AGCCGTTATG ACCAGGATGA CTACACCCAG GCGGGTAACC TGTATCGCAT CTTCTCAGAA
GACGAGAAGG CTAGACTGGC GGCGACCATC TCAGGCTCTC TGAGTCAGGC GAGCATGGAC
GTGCAGGAGC GTATGTTGGC TCACTTCTTC AAGGCTGATG AAGACTATGG TCAACGCATC
AAGCAGGGCT TAGGTCTTTA A
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| Protein sequence | MTTNYLTSQN GAPIADDQNS LSAGERGPLL LQDWHLIEKL AHFNRERIPE RIVHAKGTGV
YGTFTLTKDL SDYTIADHFN GEGKQTETFV RFSTVGGEMG SADAERDPRG FGLRFYTKRG
NHDIVGNNTP TFFLRDGIKF PDFIHTQKRN PMTNLKDPQA MWDFWSLNPE AMHQVTILMS
DRGIPANYRQ MHGYGSHTFS FWNAKGERFW VKFHFKSQQG VVNLTNEQAD KLKGIDPDSS
QRDMVAAIQD ANFPRWTVNV QIMPEADANT YHINPFDLTK VWPHGDYPLI EIGVLELNRL
PQNYFAEVEQ VALAPSNLVP GVGASPDKML QARLFAYADA QRYRIGANYN QLPVNCPHAT
QANHHQRGGA MAGTQCPFSG SQTGGDASAN YGPNSTQSAL VEPTQFAEPA LRLDGEADRY
SRYDQDDYTQ AGNLYRIFSE DEKARLAATI SGSLSQASMD VQERMLAHFF KADEDYGQRI
KQGLGL
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