| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3181 |
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| Symbol | |
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| ID | 4921676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3786798 |
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| End bp | 3788465 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164791 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
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| Protein accession | YP_001095306 |
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| Protein GI | 127514109 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.449651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAG AGTATCCACA GAAATCGAAA GAAATTGACC AATACACAGC CAATGTCCTG
CAACATGGCA TCTCACGCCG GAGCTTTCTG ACCCGCGCCG CCATGGGCAC GGGCGGGTTA
GCCTTCGCGG GTATCGCCGG CACGGCAAGC GCCTCAGAGG CGCCTGGCCA AGAATACGCA
CAGATAGGCA ATGCCTCGCT GGAGTTCATG CCTAAGCCCA AGCCAATCGC CGACAGCGAG
ATTGCCTCGA CCCAGACCTT CGATGTGGTG GTGGTTGGCG CCGGCGCATC GGGCGTACCC
GCCGCACTTT CAGCCAGAGA GAATGGTGCC AGCGTTGCTG TACTGCAAAA GCAAGCCATA
GTCGTTTCTC AGGGCAACAC AGGTTCAGGC CTAGACCTTA ACAAGTGTGA CAAAGCCGGT
GTTGAAGCCC TGGTTAACCG TCTAATGGCG GATAACGCTC ACCGCAGCCA CCCTGAACTG
CTCAGAAGCT GGGCTTATAA CTCAGGTGAA GCGGTGAAGT GGGTACTTGA CCGCGCCAAC
AAAGGTGGGG CTAAGGGTGT AGACCAAGGC ACTAAGCCAC AACACGGTAT TCATGGTATT
ACTGAGCACT CGCTGGAATT CGTCACCTCA TACTTCGGTC CTAAGCCATA CACCGCGGGC
GACGGTATGC GCGCCCTGGC GAAAACCGCT GAAAAAGCCG GTGTTAAGTT TTTCTTCAAC
ACCCCTGCAC AACAGCTGAT CCAAGATGAA ACCGGCAAAG TGATCGGCGT TATTGCGCAA
AACCGTGATG GTAAGTACCA CAAGTTTATG GCAAAGAAAG GTGTCATTCT TTCTGCCGGC
GACTACCAGA ACAATAAGGC GATGTGCGAC TTCTTTATCC CTGATCTCAA GAACTTCGAA
CGCAAGCAGA TGGATCGTAC CGGCGACGGT TTCGCCATGG CCTACTGGGC GGGCGGCGTG
ATCGAGCCTG CGGGTCACAC TAAGATGCTT CACGACTTCG ACGCGGGTCC GGCGGCAATG
TGTGATATGC CATTCCTGGT GGTTAACGGT AAAGGTGAGC GCTTCGTTAA CGAGCAGGTA
GAAATGTCAT TAATGAACAA CTACCTACGT GACGAAGTTA ACCAAGGTCG TTACAACCAA
ATCTTCGACT CTAACTATAT GGAACAGTCA AAAGACTGGC CTGGACATGC ATACACGCCT
GAAGAGTTAA AGCATTACAT GCCAGAAGTT GAAGGCGAAA AGAAAGGCGT TTACCCATCT
CAAATCAATA CCTTTGTTGC TGACACGCTA GAAGAGTTGG CAGAGAAACT CGGTTGTGAT
CCTAAGACTT TCGTTAAAAA CGTTAAGCGT TACAACGAGC TATGCAAAAC AGGTAAAGAT
GACGACTTCG GCAAGGCCCC AAGCAAGATG GCGCCTGTAC TAAAAGCGCC TTTCTACGGT
ATTCACCGCC GCATGCGTAT CTCGGCTATC ACCTCTGGCG TTCTGGTTGA TGCGAATCAT
CAGGCATTGG ATGCAGATGG TAAGCCAATC GGTGGCCTGT TCATCGTCGG CAACATGGGC
GGCGGCTTCT ACGGCGGGGT CGACTATCCA TTGACAGTGT TTGGCCTCTC CTTGGGTCGC
TGCTACACCT TCGGTTACCT GACCGGCAGA CACGTGGCCA AGTTATAA
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| Protein sequence | MSKEYPQKSK EIDQYTANVL QHGISRRSFL TRAAMGTGGL AFAGIAGTAS ASEAPGQEYA
QIGNASLEFM PKPKPIADSE IASTQTFDVV VVGAGASGVP AALSARENGA SVAVLQKQAI
VVSQGNTGSG LDLNKCDKAG VEALVNRLMA DNAHRSHPEL LRSWAYNSGE AVKWVLDRAN
KGGAKGVDQG TKPQHGIHGI TEHSLEFVTS YFGPKPYTAG DGMRALAKTA EKAGVKFFFN
TPAQQLIQDE TGKVIGVIAQ NRDGKYHKFM AKKGVILSAG DYQNNKAMCD FFIPDLKNFE
RKQMDRTGDG FAMAYWAGGV IEPAGHTKML HDFDAGPAAM CDMPFLVVNG KGERFVNEQV
EMSLMNNYLR DEVNQGRYNQ IFDSNYMEQS KDWPGHAYTP EELKHYMPEV EGEKKGVYPS
QINTFVADTL EELAEKLGCD PKTFVKNVKR YNELCKTGKD DDFGKAPSKM APVLKAPFYG
IHRRMRISAI TSGVLVDANH QALDADGKPI GGLFIVGNMG GGFYGGVDYP LTVFGLSLGR
CYTFGYLTGR HVAKL
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