| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3178 |
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| Symbol | |
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| ID | 4921673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3783257 |
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| End bp | 3784588 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164788 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001095303 |
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| Protein GI | 127514106 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAACAC CAACACAAAC CACGGCCCCC AAGGCATCGT TTATCGCCCT ACTGCCACTA
TTCCTGTTTC TGGCCCTGTT TATCGGTGCC GGCGTCTATT TCCAGAGCCA GGGCGTCGAC
TTTGCCTTCT ATCAGCTGCC GAGCGTGGTC GCCATCCTGC CCGCCATCAT ACTGGCGCTG
CTGATCTCGA AAGAGAAGCT GAACCAGAGC ATAGAGACCT TCATCGGTGG CATAGGCCAC
TCCAACATCA TCGCCATGTG TCTCATCTAC CTGCTGGCAG GTGCCTTTGC CTCTGTGGCC
AAGGCCACTG GCGGCGTAGA TGCTACCGTG GCGCTGGGGC TGTCGCTTGT GCCCTCGAAC
CTACTGCTAC CCGGTTTCTT CGTGATCGCC GCCTTCATCG CTACCGCCAT GGGTACCTCT
ATGGGCACCA TAGCCGCAGT CGCTCCCATC GCACTGGGCG TGGCCGAAGA GGCGCAGATC
GATCTGGCGC TGATGGCCGG GGCCGTGATC TCGGGCGCCC TCTTTGGTGA CAACCTGTCG
ATCATCTCTG ACACCACCAT TGCCGCGACC CGCACCCAGG GCTGTGAGAT GAAAGACAAG
TTCAGAGAAA ACCTGATCTT CGCCATTCCC GCCTCGCTGA TCACCCTGGT GGTGTTCACC
CTCGCCGGAC AAGGCCAGGC CGATGTGGCG CCGCAGCAGA TAGATTTTCT TAAGGTTATC
CCCTACCTCA CCATCTTGGT ACTGGCGGTC GCCGGGCTGA ACGTGTTCGT GGTGCTGACC
GTGGGCATCT TGCTGGCAGG CATCACCGGC TTTGCCACTC TGGACTACGG CCTGATCCAG
TTTGGCAAAG ATATCTACGC GGGCTTTAGC AACATGCAGG AGATCTTCAT CCTCTCCATG
CTGGTCGGTG GCCTGGCGGC CCTGATGCAG CAACAGGGTG GACTGGCTTT TGTGAGCAAG
CAGATTGAGA AGCTTATCGT CCGCTTCTCC AGCGCCAAGG GCGAGGCCTC GACCCGTGCC
TCTGAGCTGG GCATGGCAGG CATAGTCGCC CTGACCAACA CCTGTGTGGC CAACAATACC
GTCTCTATCG TGGTGACCGG CGATATCGCC AAAGATCTGG CCGAGAAGCA TGAGGTTACC
CCTAAGCGCG CCGCCAGTAT CTTGGATATC TTCTCCTGTA TCATTCAGGG CTTGATCCCA
TACGGTGCCC AGGCGCTGCT GATCGCCTCC ACCTTCAGCA TCAGCCCGCT GCAGGCGGTT
GCCCACGCCT GGTACTGCAT GATCCTCGCC ATAGTCGCCA TCGCCATAGT GGTGCTGCGC
AAGCGTCACT AA
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| Protein sequence | MTTPTQTTAP KASFIALLPL FLFLALFIGA GVYFQSQGVD FAFYQLPSVV AILPAIILAL
LISKEKLNQS IETFIGGIGH SNIIAMCLIY LLAGAFASVA KATGGVDATV ALGLSLVPSN
LLLPGFFVIA AFIATAMGTS MGTIAAVAPI ALGVAEEAQI DLALMAGAVI SGALFGDNLS
IISDTTIAAT RTQGCEMKDK FRENLIFAIP ASLITLVVFT LAGQGQADVA PQQIDFLKVI
PYLTILVLAV AGLNVFVVLT VGILLAGITG FATLDYGLIQ FGKDIYAGFS NMQEIFILSM
LVGGLAALMQ QQGGLAFVSK QIEKLIVRFS SAKGEASTRA SELGMAGIVA LTNTCVANNT
VSIVVTGDIA KDLAEKHEVT PKRAASILDI FSCIIQGLIP YGAQALLIAS TFSISPLQAV
AHAWYCMILA IVAIAIVVLR KRH
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