| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3157 |
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| Symbol | |
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| ID | 4921995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3758122 |
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| End bp | 3758814 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164767 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001095282 |
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| Protein GI | 127514085 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTTT CTAAACGCCA ATTTCTCAAG GGGGTTGGGG CCCTACTGGC CGGTGTCTCT
GTGTATGGTG CCACCCGCAC GCCCCAGGCC GATTCCCTAC TCCAGCCCGA GCAGGAAAGC
GAGATCAAAT ACGCCATGGT GCATGATGAG AATGCCTGTA TCGGCTGTAA CGCCTGCGTC
CAGGCCTGCC GTGAGGTCAA TCATATTCCC GAGGGCGTCA CCCGGGTGAA GATAGAACGT
AAGGGGCCCT TCGGCGAGTA CCCAGATCAG AGCTACCGCT TCAGCCGTGT CTCCTGTCAG
CACTGCGAAG CCGCGCCCTG TGTAAGGGTC TGCCCCACAG GCGCCGCCTA TATTGACAAA
GAGACGGGCA TAGTCGCGGT CAATAGCGAC CGCTGCGTGG GCTGCCAGTA TTGCATCGCC
GCCTGCCCCT ATCAGGTCAG GTATATCCAC CCCGAGACCC GCACCGCCGA CAAGTGCGAT
TTCTGTCAGA AGAGTCGCCT GGCTCAGGGG CTTCAGCCTG CCTGTGTCGA GGCCTGCCCT
ACCAAGGCAC TGACCTTCGG CAACCTCAAG GATCCCGAGT CGGATCTGGT CAAGCTGCTT
AAGCGCAAGC CCAGCTACCG CGCCAAGGTG GACCTGGGCA CCCGGCCTAA GCTGTTCCAT
ATTCAAACCA TAGATGGGGA GATAATGCTA TGA
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| Protein sequence | MQVSKRQFLK GVGALLAGVS VYGATRTPQA DSLLQPEQES EIKYAMVHDE NACIGCNACV
QACREVNHIP EGVTRVKIER KGPFGEYPDQ SYRFSRVSCQ HCEAAPCVRV CPTGAAYIDK
ETGIVAVNSD RCVGCQYCIA ACPYQVRYIH PETRTADKCD FCQKSRLAQG LQPACVEACP
TKALTFGNLK DPESDLVKLL KRKPSYRAKV DLGTRPKLFH IQTIDGEIML
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