| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3144 |
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| Symbol | |
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| ID | 4922011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3737005 |
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| End bp | 3738444 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164754 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001095269 |
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| Protein GI | 127514072 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACAC GAATCGTTAG AATAACCCCC AGATTATTCC TATCCAGAGC CAACCCCATG
CATGTACATA TCTTAGGGAT CTGCGGCACC TTTATGGGTG GTCTCGCACT CCTTGCTCGC
GCTAACGGTC ACAAGGTCAC GGGCAGCGAT GCCAACGTCT ATCCACCCAT GAGCACTCAG
CTCGAGGAGC AGGGGATAGA ACTGATCCAG GGCTTCGACC CAAGCCAGCT GGGCCAAAAC
GAGGACGATG CGCCGGATCT GGTGGTGATA GGTAATGCCA TGAGTCGCGG TAATCCCTGT
GTCGAGGCTG TGCTCAATCG TGGCCTGAAA TACACCTCTG GGCCACAGTT TCTGGCCGAG
CATATTCTGA CCAATCGTTG GGTACTGGCG GTGTCGGGCA CCCATGGCAA GACATCGACC
TCCAGCATGC TGGCGTGGAT CTTAGAAGAT TGCGGCTATG CGCCAGGCTT CTTGATTGGC
GGCGTGCCGC AAAATTTCGG TGTGTCGGCG CGGTTGGGGG ATTCCCCCTT CTTCGTGGTG
GAGGCGGACG AGTATGACAG CGCCTTCTTC GATAAGCGCT CCAAGTTTGT CCACTATCAG
CCGCGCACTC TGGTGATCAA TAACCTGGAG TTCGATCACG CCGATATCTT CGATGATTTG
AAAGCGATCC AGCGTCAGTT TAATCACGTA ATACGTACGG TACCGGGTCA GGGCAAGGTG
ATCTGGCCAT CCGCCAGCGA CGCGGTGCGC GAGGTGATCG ACATGGGCTG CTGGAGCGAG
CAAGAGACCT ATAACCTGAT GGCGGGCAGC CCAGGCTGGT ATAGCGAGCT GCTGAGCGAG
GATGGCCACA GCTTCGAGCT CTTCTTCGAT GGTGAGTCCC AGGGCGTGCT CGACTGGTCA
CTCATCGGTC AGCACAACGT GGAAAACGCC ACCATGGCGA TCGCCGCGGC CCGTCACGTG
GGCGTCAAGC CTGCGGCGGC TATCGAGGCG CTGACCCGCT TCGCACCGCC AAAGCGTCGC
ATGGAGCTGA TTGGCACTGT CAATGATATC GCCGTGTATG ACGACTTTGC TCACCACCCG
ACGGCGATTG CCACCACGCT ACAGGGCTGC CGCGCCAAGG TGGGTGAAGG TCGCATCATA
GTGGTGCTGG AGCCGCGCTC TAACACCATG AAACGCGGCG TGCACAAGGA TACCCTGGCG
GGCTCTATGG CGCTGGCCGA TGCCGCCTAC CTGTATCAGG CTGACAATAT CGACTGGGAC
GTGGAAGCGG CCATGGCCAA GGCCGAGTTG CCTGTGACTG TGCTATACCA GATAGATGAG
CTGGCGGACA GCGTGACTGC GGCGGCAAGG CCCGGCGACA CCATCATAGT GATGAGCAAC
GGTGGATTCG GCGGCCTACA CGGCAAGCTG CTGGCTAAGC TGGAAGAGAT CAAGGCTTGA
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| Protein sequence | MVTRIVRITP RLFLSRANPM HVHILGICGT FMGGLALLAR ANGHKVTGSD ANVYPPMSTQ
LEEQGIELIQ GFDPSQLGQN EDDAPDLVVI GNAMSRGNPC VEAVLNRGLK YTSGPQFLAE
HILTNRWVLA VSGTHGKTST SSMLAWILED CGYAPGFLIG GVPQNFGVSA RLGDSPFFVV
EADEYDSAFF DKRSKFVHYQ PRTLVINNLE FDHADIFDDL KAIQRQFNHV IRTVPGQGKV
IWPSASDAVR EVIDMGCWSE QETYNLMAGS PGWYSELLSE DGHSFELFFD GESQGVLDWS
LIGQHNVENA TMAIAAARHV GVKPAAAIEA LTRFAPPKRR MELIGTVNDI AVYDDFAHHP
TAIATTLQGC RAKVGEGRII VVLEPRSNTM KRGVHKDTLA GSMALADAAY LYQADNIDWD
VEAAMAKAEL PVTVLYQIDE LADSVTAAAR PGDTIIVMSN GGFGGLHGKL LAKLEEIKA
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