Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3142 |
Symbol | |
ID | 4922009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3735749 |
End bp | 3736279 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640164752 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_001095267 |
Protein GI | 127514070 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA CTACCGAAGT GATGATCTCG GCAGATGAGA TTGAACAACA ACTGGATATC CTGGCAGCGC AGATCAATGC CCATTACGCC AATAGCGAAC GCCTGCTAAT GGTTGGCCTG CTGAAGGGGT CTGTGGTCTT TATGGCCGAC CTCTGCCGCC GCATCAAGGG CCACGTTGAG ATCGATTTCA TGTCGGTATC CAGCTACGGC AACGCCATGA CCAGTTCGCG CGACGTGAAG ATCCTAAAGG ATGTGCAGTC GGATATCGAA GGCCGTGACG TGTTGATCGT CGAAGACCTG ATCGATTCGG GTAATACCCT GAACAAGGTG CGCGAGATGC TATTGCTGCG CGAACCTAAG AGCCTGGCCC TCTGCACCTT GCTGGACAAG CCAGAGCGCC GCGAGGTTGA TGTACCGGTA GACTTTATCG GCTTCACCAT TCCCGATGAG TTTATCGTCG GCTATGGTAT CGACTATGCC GAGCAGTATC GCAACCTGCC TTACATCGCT AAAGTCGTAC CCCTAGATTA A
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Protein sequence | MKHTTEVMIS ADEIEQQLDI LAAQINAHYA NSERLLMVGL LKGSVVFMAD LCRRIKGHVE IDFMSVSSYG NAMTSSRDVK ILKDVQSDIE GRDVLIVEDL IDSGNTLNKV REMLLLREPK SLALCTLLDK PERREVDVPV DFIGFTIPDE FIVGYGIDYA EQYRNLPYIA KVVPLD
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