Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3139 |
Symbol | |
ID | 4922006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3733514 |
End bp | 3733828 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164749 |
Product | hypothetical protein |
Protein accession | YP_001095264 |
Protein GI | 127514067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.78695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCCC ACTGGCCACT ACTGCTCAAG GTCGCCAGCG ACAAGCAGCT GATGCTGTTA GAGAGCCTGG AAGAGTGGCT CGCCGAGCGC GATCACCTAG AGGCCGAGTT CCTGACCCTT ATCGACAGCC AGGGCATCTG CTACCACTGC CAAGATGGCG CTCTACGCCC CTCGGACGAG AAGATAGCCC TTTCACAGAT AGTCCAATGG GTCAGCGATT ATGCCTGCCA GAATGGTCAC TTCTGCAGCG CCAAGATAGG CGCCGACAGC CTGGCGCAGC TGTTTGAGAT GGTGCGCTAT TTGGAAGATA ACTAG
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Protein sequence | MTPHWPLLLK VASDKQLMLL ESLEEWLAER DHLEAEFLTL IDSQGICYHC QDGALRPSDE KIALSQIVQW VSDYACQNGH FCSAKIGADS LAQLFEMVRY LEDN
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