Gene Shew_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3139 
Symbol 
ID4922006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3733514 
End bp3733828 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID640164749 
Producthypothetical protein 
Protein accessionYP_001095264 
Protein GI127514067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.78695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCC ACTGGCCACT ACTGCTCAAG GTCGCCAGCG ACAAGCAGCT GATGCTGTTA 
GAGAGCCTGG AAGAGTGGCT CGCCGAGCGC GATCACCTAG AGGCCGAGTT CCTGACCCTT
ATCGACAGCC AGGGCATCTG CTACCACTGC CAAGATGGCG CTCTACGCCC CTCGGACGAG
AAGATAGCCC TTTCACAGAT AGTCCAATGG GTCAGCGATT ATGCCTGCCA GAATGGTCAC
TTCTGCAGCG CCAAGATAGG CGCCGACAGC CTGGCGCAGC TGTTTGAGAT GGTGCGCTAT
TTGGAAGATA ACTAG
 
Protein sequence
MTPHWPLLLK VASDKQLMLL ESLEEWLAER DHLEAEFLTL IDSQGICYHC QDGALRPSDE 
KIALSQIVQW VSDYACQNGH FCSAKIGADS LAQLFEMVRY LEDN