| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3133 |
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| Symbol | panB |
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| ID | 4922000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3724997 |
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| End bp | 3725791 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164743 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001095258 |
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| Protein GI | 127514061 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0845037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.25245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAGA TAACCAGCTC TACCCTGCTG AAATTCAAGC AGGAAGGTAA GAAGTTCACT
GCACTCACCG CCTATGATGC CAGCTTTGCG GGCGCCTTCG ACAGCGAAGG GATCGACGTC
CTACTGGTGG GCGACTCGTT AGGCATGGTA TTGCAGGGAC ACGACGACAC CCTGCCGGTC
ACAGTCGAAG ATATCGTCTA CCACACCCGT TGTGTGCGTC GTGGCATCAA GCGTTCACTG
CTGATCGCCG ACATGCCCTT CATGAGCTAC GCCACACCAG AGCAGGCGAT GACCAATGCC
ACCGCCCTGA TGCAGGCTGG CGCCAACATG GTGAAACTCG AAGGCGGTCA CTGGCTGCTG
GAAACCGTCA CTAAGCTGAC CGAGCGCGGC ATTCCCGTAT GTGCCCACCT GGGACTCACC
CCGCAATCTG TGCATGTCTT CGGCGGCTTC AAGGTACAGG GCCGTGACGC CGACAACGCC
CAGCGCATCA TAGATGAAGC CAAGGCGATC GAGGCGGCCG GTGCCCAGCT ATTGGTGCTC
GAGTGTATCC CGGCCGCGCT GGCCAAAAGC ATCACAGAGG CCCTCACCAT TCCCGTTATC
GGCATTGGCG CAGGCGCCGA CACCGACGGT CAGATCCTGG TGATGCACGA CGTGCTGGGG
ATCTCCAGCG GTTACATCCC ACGCTTCTCG AAGAACTATC TGGCCCAAAC CGGCGAGATC
CGCAGCGCCA TTCGCGCCTA TATCGAAGAG GTCGACACTG GCGTCTTCCC CGCCGCCGAG
CATACATTTA GCTAA
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| Protein sequence | MSKITSSTLL KFKQEGKKFT ALTAYDASFA GAFDSEGIDV LLVGDSLGMV LQGHDDTLPV
TVEDIVYHTR CVRRGIKRSL LIADMPFMSY ATPEQAMTNA TALMQAGANM VKLEGGHWLL
ETVTKLTERG IPVCAHLGLT PQSVHVFGGF KVQGRDADNA QRIIDEAKAI EAAGAQLLVL
ECIPAALAKS ITEALTIPVI GIGAGADTDG QILVMHDVLG ISSGYIPRFS KNYLAQTGEI
RSAIRAYIEE VDTGVFPAAE HTFS
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