| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3130 |
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| Symbol | |
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| ID | 4921997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3721930 |
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| End bp | 3722889 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164740 |
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| Product | glutamate--tRNA ligase |
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| Protein accession | YP_001095255 |
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| Protein GI | 127514058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000103356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0817385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TAGAAAGTGT GAACAAAGGT TTTGCCGTGA TCCCCCAAGC AGACCCCTCC
CTCTCCCCCG ATAACCCAAT GCAAATCGAC AAGCCCTATG TCGGCCGTTT CGCGCCCTCG
CCCTCCGGTC CACTGCACTT TGGCTCGCTC ATCGCCGCGC TGGGCAGCTA TCTGCGTGCC
CGCGCCGAGC AGGGACAATG GCTGGTGCGC ATCGAAGATA TCGATCCCCC CAGAGAGGTA
AAAGGTGCCA GCGACCTCAT CCTCAAGACC CTGGAGGCCT ACGGCCTGCA TTGGGATGGC
GCCGTGCTCT ACCAAAGCAG CCGCCTGGAT GACTATCAGG CTAGGCTTAA CAGCCTGCTG
GCAGAGGACA AGGCTTACTA CTGCCAATGT ACCCGCAAGC AGATCCAGGC GATGGGCGGC
ACCTACGATG GCCGCTGCGC GATCCGCACA GCTAAACATA CAGCAGGCGC TATCCGCATC
CGTAACACGC TTGCGATAGA TCATTTCGAT GATGAGCTGC TGGGCCCTAT CCGGGTCGAG
CCAGAGTTTG CCGCCGAGGA CTTTATTATC AAGCGCCGCG ACGGCCTCTA CGCTTATCAA
CTGGCCGTGG TGATGGACGA TGCCTTTCAG GGGATAACTG AGGTAGTGCG CGGCGCCGAC
CTGCTCACCT CCAGCGCCCG CCAGGCGACC CTGTTTAATT TATTCGATGA CAACGCGCCT
AAGTGGCTTC ATCTGCCGCT GGCCTGCGCC GAGCCTGGGA TGAAACTCTC GAAGCAGAAT
CACGCCCCGG CCATAGATCT TAAGGCGCCC CAGGCCAGCA TCAACGCCGC GCTCGCCTTC
CTGGGCCAGG CCCCCTGCGA TATCGATAGT GTCAAGACCA TGCTGGCCCA GGCCGTGAGC
CAGTTCGAAT TGAGCCGTAT CCCGCGCCAG CAGGAGATCA TACTTGCGCC GGGCGCTTAA
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| Protein sequence | MSDIESVNKG FAVIPQADPS LSPDNPMQID KPYVGRFAPS PSGPLHFGSL IAALGSYLRA
RAEQGQWLVR IEDIDPPREV KGASDLILKT LEAYGLHWDG AVLYQSSRLD DYQARLNSLL
AEDKAYYCQC TRKQIQAMGG TYDGRCAIRT AKHTAGAIRI RNTLAIDHFD DELLGPIRVE
PEFAAEDFII KRRDGLYAYQ LAVVMDDAFQ GITEVVRGAD LLTSSARQAT LFNLFDDNAP
KWLHLPLACA EPGMKLSKQN HAPAIDLKAP QASINAALAF LGQAPCDIDS VKTMLAQAVS
QFELSRIPRQ QEIILAPGA
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