Gene Shew_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3119 
Symbol 
ID4922082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3706698 
End bp3707411 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID640164729 
Producthypothetical protein 
Protein accessionYP_001095244 
Protein GI127514047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000244362 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000043186 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTTCTAA GTCCTTATTT TAATAAAGCA CAGCAACTAG TCTCTGTGTC AGCCCAGCAG 
GCGAGTGAAT TCGCCAAGGG TGTCGCACAG GACTTTAACC CCATCCACGA TGTCGATGCC
AAGAAGTTCT GCGTTCCCGG AGATCTGCTA TTCGCCCTGG TGCTGGGACA ATATGGGCTG
AGCCAGAAGA TGACATTTCG TTTCGAGGGC ATGGTCGGTA GCGGCGTCAA CCTGGTGTTT
CCCGATGCGG TAGGCGACAG CTTCGCCATC CTGGATGACA AGGATAAGCA ATACTTGAGC
GTGAGCCGCA GCGGCGAGTC GACCCTGTGC GAGGTGCAGA CAGAATCCTT CGTGCGCAGC
TATGTGGCCT TCTCCGGGCT CAACTTTACC CATGTGCTGG TGCCGCTGAT GAAGCAGCAC
GGCATGATGA TCAACCCGGC CCGTCCTCTG GTGATCTACG AGAGCATGTC ATTTGATCTC
CATACCTTAG ACTTTGACAG TATCGCCCTC AACCTGGTGG AGCAGAATCT GGCCATCGAC
GGTAAGCGCG GCGACGTGAC CCTGAAATTT GAGCTGCACT GCGGCGATAA GCTAGTGGGT
ACCGGCGAGA AGACGCTGGT GCTTAGCGGC CTGCGTCCAC TGGAAGCCCA GAGCATGGAT
GAGATGGTGG CTCGCTACGA GGCGCGCCGC ATCGGCTATC AGCAAGCCGA CTAA
 
Protein sequence
MFLSPYFNKA QQLVSVSAQQ ASEFAKGVAQ DFNPIHDVDA KKFCVPGDLL FALVLGQYGL 
SQKMTFRFEG MVGSGVNLVF PDAVGDSFAI LDDKDKQYLS VSRSGESTLC EVQTESFVRS
YVAFSGLNFT HVLVPLMKQH GMMINPARPL VIYESMSFDL HTLDFDSIAL NLVEQNLAID
GKRGDVTLKF ELHCGDKLVG TGEKTLVLSG LRPLEAQSMD EMVARYEARR IGYQQAD