Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3107 |
Symbol | |
ID | 4922212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3686903 |
End bp | 3688060 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640164717 |
Product | peptidase M19, renal dipeptidase |
Protein accession | YP_001095232 |
Protein GI | 127514035 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.178357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTGC AAATGCAACG ACGTCAGCTA CTAAAAGCCT TGGCCGCTGC CGGTCTGTTA ACTCAGTTAT CGCCCCTGAA TGGCTGGGCA AAAACCGCAG GGAAGCCCCT CTATATCGAT GGCCTCTCCT TTTTGCCGGA GGACTTAGCC GATCTCGGCG CGTCAAAGCT CGATGCCTAC CTGTGCGACA TATCCGCCAT CGAGGCCATA GAACAGGCCG ATGGCACCAC CAACTACAAA CGCACCTACA ACGCCTGCGT CAAAAGCATC GGCGAGGCCC TAGCCAGGGT AAACGCCAAC CCAGACAAGC TACTACTAGG GCGTAGCGCC AAGGATATAC AAACGGCCCA TGCCAGCGGC CGCACCGCCG TCTTCTTCCA GATCCAGGGG GCAGACTGCG TCGAACAGAG CATAAATCAA GATCTCAACC AGGTGGATGA GTTTTATGAG CGCGGCCTAA GGGTACTGCA GCTTACCCAC CACTACGGTA ACCGCTTCAG CGGCGGCGCC CTGGACAACG ATGGCAAGCA GGGACTCGAC CTGCCGCTCA CCAAGGCCGG CCATCAGCTG ATCCACAAGC TCAACAGCAA GCGGATGCTG ATCGACGTCA GCCACTCCAG CCCTCAATCG GCGCTAGACA GCGCCAAGGC CAGCCGTGCG CCGATAGTGC AGAGCCATGG CGCCGTGCGC GCCATCGTTA ACCATGCCCG CTGCTCACCC GACGAGGTAA TCAAGGCAAT TGCCGACACC GGCGGCCTGT TCGGCGTCTT CATGATGACC TTCTGGCTCA CCACTGAGCA AACGCCCACC ACAGACCACT ACCTGGAACA GCTCAAACAT GTGGCCAATG TCGGCGGCAT AGACGCCGTG GCGATTGCCA ACGACTACCC GCTGCGGGGC CACGAGAAGC TCTTGGAACT CAACAACGAC AACGCCGAAG GCGTGAAACA ATATGTCGAG TGGTGGCATA GCCTGCGAGC CCGCGGCGTA CTAGGCTTCG ACCACGACCC CAAACACGTG GTGATCCCAG CGCTTAACCA TATCGAGCGC ATGGAGCGTA TCGACAACGC TCTGGCCCGC GCCGGATTCA GCAGCGGCGA TCGCGCTAAA ATAATGGGCG GGAATTGGCA GAGGGTGTTG ACCGAGGTAC TAGGCTAG
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Protein sequence | MPVQMQRRQL LKALAAAGLL TQLSPLNGWA KTAGKPLYID GLSFLPEDLA DLGASKLDAY LCDISAIEAI EQADGTTNYK RTYNACVKSI GEALARVNAN PDKLLLGRSA KDIQTAHASG RTAVFFQIQG ADCVEQSINQ DLNQVDEFYE RGLRVLQLTH HYGNRFSGGA LDNDGKQGLD LPLTKAGHQL IHKLNSKRML IDVSHSSPQS ALDSAKASRA PIVQSHGAVR AIVNHARCSP DEVIKAIADT GGLFGVFMMT FWLTTEQTPT TDHYLEQLKH VANVGGIDAV AIANDYPLRG HEKLLELNND NAEGVKQYVE WWHSLRARGV LGFDHDPKHV VIPALNHIER MERIDNALAR AGFSSGDRAK IMGGNWQRVL TEVLG
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