| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3100 |
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| Symbol | |
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| ID | 4922264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3681053 |
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| End bp | 3681496 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164710 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001095225 |
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| Protein GI | 127514028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCC GTCAAATATT GTGCCCAACG GATTTTTCCG AGACGGCCTC TCACGCCCTG
GGCTATGCCA TCGAGATGGC GACGCTGTAT GGCGTGGATC TGCGTATCGT TCATGTGGTG
AGTGAACCCT ACGGCGCCCA TAACTATGGG ATAGTGGTGG AGAGTAATGA GGAACTGGAG
CAGCACCTGC ATGCCTATGC CAACGGCAAG CTAGGTGAGA TAGTCAGGGA CGCGCAGATT
AGAATGCCGC CCCATCTCAA GGTGCGCAGC GAGGTGCGTA CCGGCGGTGT GTTAGGTCAG
ATATTGCTCG ATGCCGAAGA GAACGATGTA GGCATGATAG TGGTCGCCAG CCATGGTCAT
ACCGGGCTCG CCCACCTGTT GAATCCGAGC GTGGCAGAGG AGCTGGCCAA TAAAGCCAAG
TGCCCCGTGA TGGTGGTGAA ATAG
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| Protein sequence | MRTRQILCPT DFSETASHAL GYAIEMATLY GVDLRIVHVV SEPYGAHNYG IVVESNEELE
QHLHAYANGK LGEIVRDAQI RMPPHLKVRS EVRTGGVLGQ ILLDAEENDV GMIVVASHGH
TGLAHLLNPS VAEELANKAK CPVMVVK
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