Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3093 |
Symbol | |
ID | 4922257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3673945 |
End bp | 3674499 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640164703 |
Product | hypothetical protein |
Protein accession | YP_001095218 |
Protein GI | 127514021 |
COG category | [S] Function unknown |
COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGA TAGCCCACAC GCCAGACGAC ATCATTCGCT TCTGGTTCGA GGAGATTGAA CCTAAAGCTT GGTTTGTCAA AGACCTCGCC TTCGACAAGG TGCTTCAGAC CCGCTTCGGC GAGCTGCTCA CCCAGGCCAA ACAGGGCGAA CTCTACCACT GGCGCACCAC GCCACAGGGG CGCCTGGCCG AGATTATCGT GCTGGACCAG TTTAGCCGTA ACATCTACCG GGATACGCCA GAAGCCTTCG CCGCCGATCC CATGGCGCTA ACCCTGGCCC AGGAAGCCGT GGCCGCCGGC ACAGACAAGG CGCTGCAGCC TAAACAGGTT CCCTTTCTCT ACATGCCCTA CATGCACAGC GAGTCGCAGG CAATTCACGA GGTCGCCCTG ATCCTGTTTA ATCGTGAGGG CGCCGAGAAC AACCTGGCGT TTGAGCTGCG CCACAAGGCG ATTATCGACC GCTTTGGACG CTATCCCCAT CGCAATGCCA TCTTGGGACG CGAGTCCACC CAAGAGGAGC TGGCGTTTCT CGCCGAGCCT GGCTCAAGTT TCTAA
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Protein sequence | MNRIAHTPDD IIRFWFEEIE PKAWFVKDLA FDKVLQTRFG ELLTQAKQGE LYHWRTTPQG RLAEIIVLDQ FSRNIYRDTP EAFAADPMAL TLAQEAVAAG TDKALQPKQV PFLYMPYMHS ESQAIHEVAL ILFNREGAEN NLAFELRHKA IIDRFGRYPH RNAILGREST QEELAFLAEP GSSF
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