Gene Shew_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3093 
Symbol 
ID4922257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3673945 
End bp3674499 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content59% 
IMG OID640164703 
Producthypothetical protein 
Protein accessionYP_001095218 
Protein GI127514021 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA TAGCCCACAC GCCAGACGAC ATCATTCGCT TCTGGTTCGA GGAGATTGAA 
CCTAAAGCTT GGTTTGTCAA AGACCTCGCC TTCGACAAGG TGCTTCAGAC CCGCTTCGGC
GAGCTGCTCA CCCAGGCCAA ACAGGGCGAA CTCTACCACT GGCGCACCAC GCCACAGGGG
CGCCTGGCCG AGATTATCGT GCTGGACCAG TTTAGCCGTA ACATCTACCG GGATACGCCA
GAAGCCTTCG CCGCCGATCC CATGGCGCTA ACCCTGGCCC AGGAAGCCGT GGCCGCCGGC
ACAGACAAGG CGCTGCAGCC TAAACAGGTT CCCTTTCTCT ACATGCCCTA CATGCACAGC
GAGTCGCAGG CAATTCACGA GGTCGCCCTG ATCCTGTTTA ATCGTGAGGG CGCCGAGAAC
AACCTGGCGT TTGAGCTGCG CCACAAGGCG ATTATCGACC GCTTTGGACG CTATCCCCAT
CGCAATGCCA TCTTGGGACG CGAGTCCACC CAAGAGGAGC TGGCGTTTCT CGCCGAGCCT
GGCTCAAGTT TCTAA
 
Protein sequence
MNRIAHTPDD IIRFWFEEIE PKAWFVKDLA FDKVLQTRFG ELLTQAKQGE LYHWRTTPQG 
RLAEIIVLDQ FSRNIYRDTP EAFAADPMAL TLAQEAVAAG TDKALQPKQV PFLYMPYMHS
ESQAIHEVAL ILFNREGAEN NLAFELRHKA IIDRFGRYPH RNAILGREST QEELAFLAEP
GSSF