| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3085 |
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| Symbol | |
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| ID | 4922328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3665501 |
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| End bp | 3666013 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164695 |
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| Product | Lipocalin family protein |
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| Protein accession | YP_001095210 |
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| Protein GI | 127514013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3040] Bacterial lipocalin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATGGC CTGTCACCTT TTGTCTTATT TGTCTGTTAA CCCTGCTAAC GGCCTGTACC
AGCGCGCCCA AGGGGATAGC GCCGGTGGAG GAGTTCGAGC TCTCCAGATA CCTGGGCACC
TGGCATGAGA TCGCCCGGCT CGATCACAGC TTCGAGCGCG GCCTGAGCCA GGTAACCGCC
GAGTATCAAC TGCGGGGCGA TGGTGGCGTG AGTGTGGTCA ATCGCGGCTT CGATGCGCAA
TCACAAAGCT GGAAAACCGC CGAGGGTAAG GCCTACTTTG TCGAGTCGCC CGATATTGGC
CACCTCAAGG TCTCCTTCTT CGGTCCCTTC TATGGCGCCT ATGTGATCTA CCGTCTGGAT
GCAGATTATC AGTACGCCTT CATCACCAGC TTTAATCGCG ACTATCTCTG GCTGCTGGCG
CGCACGCCCG AGGTGGATGA GTCGGTAAGA CAAGCCTTTA TCACCCAAGC AGAGAAGCTG
GGGTTCGATA CCCAGGCGCT CATTTGGGAG TAA
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| Protein sequence | MRWPVTFCLI CLLTLLTACT SAPKGIAPVE EFELSRYLGT WHEIARLDHS FERGLSQVTA
EYQLRGDGGV SVVNRGFDAQ SQSWKTAEGK AYFVESPDIG HLKVSFFGPF YGAYVIYRLD
ADYQYAFITS FNRDYLWLLA RTPEVDESVR QAFITQAEKL GFDTQALIWE
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