| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3078 |
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| Symbol | |
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| ID | 4922321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3652393 |
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| End bp | 3653940 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164688 |
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| Product | Ppx/GppA phosphatase |
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| Protein accession | YP_001095203 |
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| Protein GI | 127514006 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCTTAG TCACACAACG CCATTTTGTC GCTATCGACA TGGGCTCAAA CAGTTTTCAT
CTCATGATTG CCAGGGAGCA GGACGGCAGT CTGCAGATCC TCCACAGGGA GAAGGAGCAG
GTCCGTCTGG CTCAGGGGCT CAACGCCGAG GGCTACCTGT CTGACGAGGC GATGGCCCGC
GGCCTAGAAT GCCTGAGAAA CTTCGGTCAG CGTTTTTCCG ATCTCCTTGA GACTCAGATC
CGTCTGGTGG CGACCCATAC CCTGAGAGTC GCCAAGAATC GCGACAAGTT TCTCAAGGCG
GCGCTGAAGA TCATCCCCTT TCCCATCGAG GTGATCTCCG GCCACGAAGA GGCCAGGCTT
ATCTATTCGG GTATCGCCCA GAGTCAGGTG TTGGCGCGCA ATAATTTGGT AATCGATATT
GGCGGCGGTT CCACCGAGGT GGTGATTGGC GAGAAACACC AGCCGGTGAA ACTCTCCAGC
CTGCGCTGCG GCTGCGTCAG CTTTAACGAG CGCTTCTTCG AAGATGGCAC ATTGACCACG
GCGGCCTTTC GTGCCGCTCA GGCCGCTGCC GACAGGCAGT TCTCCTCGCT TTCCAAGGAA
TATTTCGAGG CTGACTGGGA GCTGGTGCTG GGTAGCTCTG GCTCGGTCAA GGCGATCTGC
GAGGCCTTGG CGGAACTGGC GCGGTGGGAG AGGCTGGCTG GTGAGGGTGC CAGTGAAGAG
ACACAAGAGA GCGATATCGA GCCCGGCCAC TATGCCCTCG TGACCCTGAG TCAGCTCAAG
CGTCTCAAGC GCTTCCTGAT AGAGGCGGGT CATGTGGACA GGCTAGATTT TGCCAATATC
GATCGCAAGC GCATCATACT GGTGCCGGCG GGGCTGGCCA TTCTGCTCAG CTTCTTTCGC
CGTCTGGAGA TCCAGCAGCT TAGCTTTACC CCGGCGGCCC TGCGTGAAGG CGTGCTCTAC
GAGCTGGCGC AGATAGGTCA GTATCATGAT GTGCGCCATC GCACCGTAGA CAGTATTGCT
CAGCTCTATC ATGTGGATAT GGCTCAAGGC GCCAGGGTGT GTAAAAGCGC CATGGCGCTG
TTCGAGTCGG TGGCCGATGC CTGGGAGATC CGTCCCCAGG CGAGGCTGCT GGCCTATGCC
GCGACCCTGC ATGAGATAGG CATACACATC AACTCCCGCT CCCACCATAA GCATGGCGGC
TATATCATAG CCAACAGCGA TCTGCCGGGC TTTAGCCAGG ATCTGCAGCA GGATCTGGCG
CTGCTTATTG GCAATCAGCG AAAGAAGCCG CAGTTCGAGC AGCTCAACGC CCTGCCGGAT
GGACGGCGCC AGCTGATGGT GCGCTTGTTG TGTCTGCTGC GCCTCGCCAT CTTGGTTAAT
CTCGGCCGGG TCGCTCAGAG CCTGCGCCTA AGCTGCGCGC CGCTGGACAC CAATGAACTG
GCGCTGCTGC CCGAGCAGAG TGCGCGGGTG GACCTGCTAC TTAAGGATCT CAAGCGGGAG
AAGAAGCATA TGCGCGAGCT GGGCCTTAGC CTGAGGCTGG AGAGTTAA
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| Protein sequence | MALVTQRHFV AIDMGSNSFH LMIAREQDGS LQILHREKEQ VRLAQGLNAE GYLSDEAMAR
GLECLRNFGQ RFSDLLETQI RLVATHTLRV AKNRDKFLKA ALKIIPFPIE VISGHEEARL
IYSGIAQSQV LARNNLVIDI GGGSTEVVIG EKHQPVKLSS LRCGCVSFNE RFFEDGTLTT
AAFRAAQAAA DRQFSSLSKE YFEADWELVL GSSGSVKAIC EALAELARWE RLAGEGASEE
TQESDIEPGH YALVTLSQLK RLKRFLIEAG HVDRLDFANI DRKRIILVPA GLAILLSFFR
RLEIQQLSFT PAALREGVLY ELAQIGQYHD VRHRTVDSIA QLYHVDMAQG ARVCKSAMAL
FESVADAWEI RPQARLLAYA ATLHEIGIHI NSRSHHKHGG YIIANSDLPG FSQDLQQDLA
LLIGNQRKKP QFEQLNALPD GRRQLMVRLL CLLRLAILVN LGRVAQSLRL SCAPLDTNEL
ALLPEQSARV DLLLKDLKRE KKHMRELGLS LRLES
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