| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3076 |
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| Symbol | |
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| ID | 4922319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3650010 |
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| End bp | 3650624 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164686 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001095201 |
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| Protein GI | 127514004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA GTGCGTGGCT GGGGTTGTTG GCCATCTGTT GTTTGGGCGC CATGTCGCCC
GGGCCGAGTC TGGCCATGGT GGTGCGTCAT ACCCTGGGCG GTGGCCGGGC CAACGGCATC
GTCTGCGCCT GGGCGCACTC CATTGGCATA GGTGTCTACG CTTTGGTGAC CCTGCTGGGG
CTGGCGGTGC TGCTTAAACA GGCCCCACTG GTGTTCAATG GCATAGCGAT CCTCGGCGCC
CTCTATCTTG CCTATATCGG CGTGCAGGCG CTGCGCTCCA AGGGCGGTAT GTCGGACAAG
CTGGCGGCGG GTAAGTCGAC AGATTGGTTG ACGGCGGCCC GCGATGGCAT TGCCATCTCG
CTGTTTAACC CTAAGATCAT GCTGTTCTTT CTGGCGCTCT TCAGCCAGTT TGTGATGGTG
GCCGACGAGC TGTGGGGCAA GTCGCTTATC GTGTTGACGC CGCTGGTGGT CGATGGCCTC
TGGTATACCT TGATTGCGTT CTTGCTGTCG CACAAATCCG TACTGCCTAA GCTAAGGGAG
AAGGCGGCGC TGATCGACAA GCTCTCTGGC GTGGTGTTGA TTCTGCTGGC GGTGCGGGTG
CTGGTGACCC TCTAG
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| Protein sequence | MSFSAWLGLL AICCLGAMSP GPSLAMVVRH TLGGGRANGI VCAWAHSIGI GVYALVTLLG
LAVLLKQAPL VFNGIAILGA LYLAYIGVQA LRSKGGMSDK LAAGKSTDWL TAARDGIAIS
LFNPKIMLFF LALFSQFVMV ADELWGKSLI VLTPLVVDGL WYTLIAFLLS HKSVLPKLRE
KAALIDKLSG VVLILLAVRV LVTL
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