| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3069 |
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| Symbol | |
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| ID | 4922669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3644976 |
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| End bp | 3645587 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164679 |
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| Product | 5-formyltetrahydrofolate cyclo-ligase |
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| Protein accession | YP_001095194 |
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| Protein GI | 127513997 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
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| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.25235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAACCAG CCTTCGCGCC GAGCACCGCC AATCAAGAAA ATCGTCAGGC GATTAGAAAT
CAGATCCGCA GTGCGAGACG GGCGATCCCC GAGCAGACCC AGCAGCAATT TGCCCAGGAG
GCGGCCAGCA GACTGATGGC GGTGATTAGT CAGCGTCAGG CCAAGCATGT GGCGCTTTAT
CTGACCAGTG ATGGCGAGCT GGATACCCAG CCGCTGATTG AAACCCTGTG GCAGGCAGGG
GGGAATGTCT ATTTGCCGCG TCTGCACCCC TTCTCACGGG GCAACCTGCT GTTTTTTAAA
TACCATCCCA CCAGCCACCT GATCCAGAAT CGCCTCAAGA TCTGGGAGCC CAAGCTCAAC
ATCACAGAGA TGATCTTGCC CCAGCATCTG GATGTGATCA TCACTCCCCT GGTGGCCTTC
GATGAGCAGG GAAATCGTAT GGGAATGGGC GGCGGCTATT ACGACCGTTG CCTGAGCGAC
TGGCAGCTTA GGGGGAAACC CTACCCCATT GGCTATGCCC ATGATTGCCA GCGAGTCGAA
TCACTGCCCA CCGAGCATTG GGATGTGCCC CTGCCCATGA TAGTGACTCC ATCGGCTACT
CACACAAGTT AA
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| Protein sequence | MKPAFAPSTA NQENRQAIRN QIRSARRAIP EQTQQQFAQE AASRLMAVIS QRQAKHVALY
LTSDGELDTQ PLIETLWQAG GNVYLPRLHP FSRGNLLFFK YHPTSHLIQN RLKIWEPKLN
ITEMILPQHL DVIITPLVAF DEQGNRMGMG GGYYDRCLSD WQLRGKPYPI GYAHDCQRVE
SLPTEHWDVP LPMIVTPSAT HTS
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