| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3065 |
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| Symbol | |
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| ID | 4922665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3640696 |
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| End bp | 3641904 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164675 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_001095190 |
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| Protein GI | 127513993 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0203848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGTA CACAAACCTA TGACGTTGCC ATCATCGGCG GAGGCATGGT CGGGCTGGCA
ACCGCCATCG GCCTTGGGCA GGAAGGGCTG AGAGTCGTGG TGATCGATGC CGGCGAAACC
CAGGCGGTAT CCGGTGAGGC CAGATTAAGA GTCAGCGCCA TCAACAAGGC GAGTCAGCGA
TTACTTACCC ATCTGGGGGC CTGGGCCTAT ATCGACGAGT CTCGCGTCGG CCCCTATCAG
AAGATGGCGG TGTGGGATAA GGATAGCTTG GGCAAGATAG GTTTCGATGC TCATTCGATC
AGCGAGCAGA CCCTGGGCAG CATCATAGAA AATGACAACA TCAGCCATGC CTTGGCGACC
CGTGCCGGTG AGCTAAGTGA AATCACCCAC CTGGAAAATC ACCGTCTGGA GAAGATAGCC
TTTGGCGAGC GTGAGGCCTG GCTGACCCTG GATAACGGCG ACAACCTGTC GGCGGCACTG
GTGATTGGCG CCGATGGTGC CAATTCCTGG GTGCGCGAGC AGTGCAAGAT CCCTATGACC
TTCTGGGACT ATGGTCATCA CGCCATTGTC GCCTCGATCC GCACCGAGCT GCCGCACAAT
GCCACCGCCA GACAGGTGTT CTTAAGTGAT GGCCCATTGG CGTTTCTGCC GCTGTTTGAG
CCAAGTCTCT GCTCTATCGT CTGGTCCGTG CCTCCTGCCA AGGCGCAGTC GCTGCTGGAG
GGGGACAAGG TGCAGTTCGA ACGCAGCCTG ACCGCCGCCT TCGACGGTAA GCTGGGCATG
TGTACGCTGG AGAGTGAGCC CCAGGCCTTC CCGCTGCGGA TGCGTTATGC CCGTCACTTT
GCCCGTCACC GTCTGGTGCT TGCGGGGGAT GCGGCCCACA CCATACATCC GCTGGCAGGC
CAGGGGGTTA ACTTGGGCTT CTTGGACGCC GCCGCCATTA TCGAGACCCT GAGCGAACTC
AAGGCCAAGG GCAAGGATCT CGGCGATTAT GCCAATCTTC GTCCGTTAGA GCGTTGGCGT
AAGGCGGACG CGCTGGAGAT GATCGCGGCG ATGGAGGGCT TCAAGCGGCT GTTCGAAGGC
AGTAATCCGG TGAAAAAAGC CCTGCGGGAT CTGGGTCTCA ATCTGGTGGA TAACCTTTCT
CCTGTGAAAA CACTGTTTAT GCAACAGGCT ATGGGTAACA AAACCCGCTT GCCTGAGTTG
TGTAAATAA
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| Protein sequence | MFSTQTYDVA IIGGGMVGLA TAIGLGQEGL RVVVIDAGET QAVSGEARLR VSAINKASQR
LLTHLGAWAY IDESRVGPYQ KMAVWDKDSL GKIGFDAHSI SEQTLGSIIE NDNISHALAT
RAGELSEITH LENHRLEKIA FGEREAWLTL DNGDNLSAAL VIGADGANSW VREQCKIPMT
FWDYGHHAIV ASIRTELPHN ATARQVFLSD GPLAFLPLFE PSLCSIVWSV PPAKAQSLLE
GDKVQFERSL TAAFDGKLGM CTLESEPQAF PLRMRYARHF ARHRLVLAGD AAHTIHPLAG
QGVNLGFLDA AAIIETLSEL KAKGKDLGDY ANLRPLERWR KADALEMIAA MEGFKRLFEG
SNPVKKALRD LGLNLVDNLS PVKTLFMQQA MGNKTRLPEL CK
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