| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3064 |
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| Symbol | gcvT |
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| ID | 4922664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3639125 |
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| End bp | 3640219 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164674 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001095189 |
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| Protein GI | 127513992 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0393389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAATA AAACTGTACT CTTTAACAAG CACCTAGAAG CTAACGCCAA AATGGTCGAC
TTTCACGGTT GGGACATGCC GCTAAACTAC GGCTCTCAAA TCGAAGAACA CCATGTTGTG
CGTCAAGACG CAGGTATGTT TGACGTGTCT CACATGACAG TAGTTGATGT TACGGGTGCT
GAGGCCTGTG ATTTTCTTCG TAAGCTACTG GCCAACGACG TCGCCAAACT CAAGGTGCCG
GGTAAGGCAC TCTACGGTGG CATGTTAGAC CACAATGCAG GCGTTATCGA CGACCTGATC
ACCTATTATC TCAGCGACAC CCATTACCGT ATCGTAGTGA ACTCGGCCAC TCGCGAGAAA
GATCTCGCCT GGATCACCGA GCAAGTTAAA GGCTATGACG TGACTGTCAC TGAGCGTCCT
GAGCTGGCGA TGATCGCCGT TCAAGGTCCT AACGCTAAGG CGAAAGCGGC GGCGGTATTT
ACCGACGAGC AAAACGCAGC GGTTGAAGGC ATGAAGCCTT TCTTCGGTGT GCAGTCTGGC
TCTCTCTTCA TCGCAACCAC AGGTTACACA GGCGAAGCCG GTTACGAGAT CATCGTACCC
GAGGCTGAAG CCGAAGCCCT GTGGCAAGCC CTGCTAGACA ATGGCGTTAA GCCATGCGGT
CTGGGCGCCC GCGACACCCT ACGTTTAGAA GCAGGCATGA ACCTGTACGG CCAAGATATG
GACGAGAGCG TTAACCCGCT AGCGGCCAAC ATGGGCTGGA CCATCGCCTG GGAACCTGAA
GACCGTGACT TCATCGGCCG CGAAGCGCTA GCCGCTATCA AGGCCGCCGG CACAGATAAG
CTAGTTGGTC TGGTGATGGA AGCCAAGGGC GTACTGCGCA CCGGCATGCC AGTCTTCTTC
ACCGACGCAG ACGGCGTTGA GCAGCAGGGC GCTATCACCA GCGGCACCTT CTCTCCTACT
CTGGGCTACT CAATCGCCAT GGCCCGGGTG CCAAATTCTG TTGGCGATGT CGCAGAAGTA
GAGATGCGTA AGAAGCGCGT CCCTGTTAAA GTGATCGCAC CTAGCTTCGT GCGCAACGGT
AAGCAGGCTT TCTAA
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| Protein sequence | MANKTVLFNK HLEANAKMVD FHGWDMPLNY GSQIEEHHVV RQDAGMFDVS HMTVVDVTGA
EACDFLRKLL ANDVAKLKVP GKALYGGMLD HNAGVIDDLI TYYLSDTHYR IVVNSATREK
DLAWITEQVK GYDVTVTERP ELAMIAVQGP NAKAKAAAVF TDEQNAAVEG MKPFFGVQSG
SLFIATTGYT GEAGYEIIVP EAEAEALWQA LLDNGVKPCG LGARDTLRLE AGMNLYGQDM
DESVNPLAAN MGWTIAWEPE DRDFIGREAL AAIKAAGTDK LVGLVMEAKG VLRTGMPVFF
TDADGVEQQG AITSGTFSPT LGYSIAMARV PNSVGDVAEV EMRKKRVPVK VIAPSFVRNG
KQAF
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