| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3063 |
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| Symbol | |
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| ID | 4922663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3638542 |
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| End bp | 3638931 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164673 |
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| Product | glycine cleavage system protein H |
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| Protein accession | YP_001095188 |
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| Protein GI | 127513991 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.210618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATA TTCCGACTGA ATTGAAATAC GCTTCTTCAC ACGAATGGAT CCGCAGAGAA
GAAGACGGTT CATACACTGT TGGTATCAGT GAGCACGCCC AAGAGTTGCT AGGCGACATG
GTATTCGTTG AGCTGCCAGA AGTGGGCGAC AGTGTTAGCG CCGGCGATGA CTGCGCGGTA
GCCGAGTCGG TTAAAGCCGC TTCAGACATC TACGCACCCG TTTCAGGTGA AGTGGTAGCG
GTTAACGAAG CGCTAGAAGA TTCTCCTGAG CTGGTTAACA GCGACGCATA CGGTGATGGC
TGGTTCTTCC GCATCATGCC AAGCGACCTG AGCGAACTAG ACAATTTGCT TGATGCCGAA
GGCTATCAAG CGGTTATCGA CGAAGAGTAA
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| Protein sequence | MSNIPTELKY ASSHEWIRRE EDGSYTVGIS EHAQELLGDM VFVELPEVGD SVSAGDDCAV
AESVKAASDI YAPVSGEVVA VNEALEDSPE LVNSDAYGDG WFFRIMPSDL SELDNLLDAE
GYQAVIDEE
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