| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3058 |
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| Symbol | |
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| ID | 4922658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3629157 |
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| End bp | 3630353 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640164668 |
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| Product | beta-lactamase |
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| Protein accession | YP_001095183 |
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| Protein GI | 127513986 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTA GCCATTTCAC ACTCACAATG ATGTTTCTTG CTTTGGCAGG ATGCTCGGTC
AGCAACCAAG AATCGACAGC CGCAAATCAA CAACTCGCCC GCCAACAAGC ATTCGAAAGC
AGCATTCGTT CAATCGACGA TGATGGAAAC AGCAGCGCAT CAACCAATAC GCTGGAAGCG
CGAATGAAGG CTTATGGCGT CCCGGCGGTG AGCATTGCCG TATTTGATAA CAACCAAATT
ATCTGGTCGA AGGGATACGG CAAACCAGAC ATAGAATCGA ACCAAGGAGT AACTACGGAT
ACTCTGTTTC AGGCCGCTTC CATTTCGAAA ACGGTCACCA GTGTCGCAGC ATTTAAAATG
ATTCAGAACG GCAACTTTGA GCTTGATGAA GATGTGAACT TAAAACTTAA ACGTTGGCAT
GTACCCGAAA ACCAATTTAC TCAACAACAA AAAGTCACAC CAAGCCGGAT CATGAGCCAC
ACATCTGGGC TGAATGTCTC TGGATTTGAA GGTTATGCCC AAAACCAGAC TATTCCCTCA
TTAGTTCAAA TATTACAAGG CAGTAGCCTG AGTAACTCTC CTGCCGTTAA GGTCTTTCAA
ACACCAGGTG AATCTGAGTA TTACTCAGGC GGAGGCATGA CAGTCTTGCA ACTCTTGATG
GAAGACAGCA GTGCGCTGCC TTTCTCACAA CTGATGCAAC AATTGATACT CAAGCCTTTA
AATATGAGCC AAAGCTCATT CGAACTGGCA CTGCCAAATG AACTCCAGAG CCAAATTGCA
AAAGGATACG ATAGCAAGCA ATCCATGATT GAAGGGGGCT ACCATCTCTA CCCAGAGAAG
GCGGCAGCAG GTCTATGGAG CACACCCACC GATTTAGCAA AATTTATGAT AGCCCTGGGT
AAAGCCTACC GCGGCGAGGA TGAAACTTTG CTATCACAAC AATCAGCCAA AACCATGTTA
ACCAGAGTGC CCGGCGCGGG TGGAACAGGC ATAGGAATAG ATGGTGAAGC AGACGCTTTT
CGCTTTAGGC ATAGCGGCGG AAACGCCGGA TACACCTGCT ATGCAGTTTC CTTTGCAAAT
TCGGGACGAG GCTTCGTTGT GATGACCAAC TCGGACAACG GCTTTCAATT AATCCACGAA
ATATCCAGAG CCGTATCGGA GGCTTATGGT TGGCCTCCAA TGTGGATGCG TGAATAG
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| Protein sequence | MKLSHFTLTM MFLALAGCSV SNQESTAANQ QLARQQAFES SIRSIDDDGN SSASTNTLEA
RMKAYGVPAV SIAVFDNNQI IWSKGYGKPD IESNQGVTTD TLFQAASISK TVTSVAAFKM
IQNGNFELDE DVNLKLKRWH VPENQFTQQQ KVTPSRIMSH TSGLNVSGFE GYAQNQTIPS
LVQILQGSSL SNSPAVKVFQ TPGESEYYSG GGMTVLQLLM EDSSALPFSQ LMQQLILKPL
NMSQSSFELA LPNELQSQIA KGYDSKQSMI EGGYHLYPEK AAAGLWSTPT DLAKFMIALG
KAYRGEDETL LSQQSAKTML TRVPGAGGTG IGIDGEADAF RFRHSGGNAG YTCYAVSFAN
SGRGFVVMTN SDNGFQLIHE ISRAVSEAYG WPPMWMRE
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