| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3054 |
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| Symbol | |
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| ID | 4922793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3626609 |
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| End bp | 3627187 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164664 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095179 |
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| Protein GI | 127513982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCCAA CCTCAAGAGA TGGATGTTCG ATGAACCTCA ACCTTTTATT CGCAATGGCC
TTTGGCTTTA TCATCATTTT GACCCTGCTG TCGCGACTAG GCAGTAGCAC CAGCAGTCGC
CACTACCAAT ATCGTAAACA TAAAGCCCTG TTTACCCCCG CCGAGCGATC GTTTCTGGGG
GTGTTAGATA ACGCCGTTGG CGAGCAATAC CGTATCCTTG GCAAGGTACG CATTGCCGAT
GTGATCACTC CAGAAAAGGG GATGACGCGC CAACACTGGC AAAATGCCTT CAACAAGATC
TCCGCCAAAC ACTTTGATTA TCTCCTCTGC GATAAACAGA CCCTGGACGT TATCGCCGCC
ATCGAACTCG ACGACAAGAG TCACAAGCAG GCCAAGACCA TAGCGCGCGA CCAACTGGTG
GAAGATGCCT GTCGCACTGC GGGGCTTCCT CTGATTCGGT TCGACGCCAA ACGCGGTTAT
CATGTCGAAA GCGTAAGAAC CACTATCGCG TCGACACTCG AGCCGGATTT TGAACCCGAG
ATTGAAACCA TTCCCCAGAT AATCGCGAGT AGAGATTGA
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| Protein sequence | MTPTSRDGCS MNLNLLFAMA FGFIIILTLL SRLGSSTSSR HYQYRKHKAL FTPAERSFLG
VLDNAVGEQY RILGKVRIAD VITPEKGMTR QHWQNAFNKI SAKHFDYLLC DKQTLDVIAA
IELDDKSHKQ AKTIARDQLV EDACRTAGLP LIRFDAKRGY HVESVRTTIA STLEPDFEPE
IETIPQIIAS RD
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