| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3048 |
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| Symbol | |
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| ID | 4922787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3620607 |
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| End bp | 3621653 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164658 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001095173 |
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| Protein GI | 127513976 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TCGGATTTGC CGCCGAGTCG GCCCATAGTC CATTACAACC CTATGAATAT
GACTGCCGCC CCCTCAGAGA AGATGATGTC GCCATCGAGA TCCTCTACAG TGGCGTGTGT
CACAGCGACC TGCACACGGT AAACAACGAC TGGGGCTGGA CAGTCTTCCC CACAGTGCCC
GGCCATGAGA TCGTCGGCCG CGTGGTCGAG GTCGGCAGCC AGGTCAGCCG TTATAAGGTT
GGCGATCAGG TGGCCGTGGG TTGCATGGTC GACAGCTGCC AAAGCTGCAG CCAGTGCCAT
AGCGGTGAGG AGCAGTTTTG CGAAGCGGGA TTCACCCAGA CCTATAACAG CGTCGATCGT
CACACCCAGG CGATCACCAA GGGCGGCTTT GCCAAACACA TAGTGGTGAG ACAGGAGTTT
GTACTCAGCA TCCCTAAGTC GCTGGATCTC GCCAAGGCGG CCCCCTTGCT GTGCGCCGGG
ATCACCACCT ACTCGCCCCT AAGAACCTGG AACGTCGGCC CCGGCAGCCA GGTGGCCATC
ATAGGCATGG GCGGCTTAGG TCATATGGCG ATTAAGCTCG CCGTCGCCAT GGGCGCCCAT
GTAACAGTGA TCAGTCGCTC CCAGGATAAA CAGGGGGATG CCCTCGACTT GGGTGCCAAC
GATTTTCTGC TCTCCAGCGA GCCAGAAAGC ATGGAACTAT CGGCCAATCG TTTCGATCTG
ATACTCGACA CTGTGCCGGT AAAACATGAC ATCACCCCTT ACCTGCCGCT GCTCAAGGTA
GACGGCACCC TGACCCTGGT CGGCCAGGTA GGGCCGATTG CCGAGGTCAA TACCGTGCCT
ATGGTCATGG GACGCCGCCG CATCGCCGCA TCGCTCATCG GCGGTATCGC GCAGACCCAG
GAGATGCTCG ACTTCTGCGC CAAGATGAAC ATTCTGCCAG AAGTGGAGAT GATCAAGATG
GAGGAGATCA ACCAGGCATT TGAACGCCTC GAACGGGCCG ACGTGCGTTA TCGTTTCGTC
ATCGACATGC AGGCATCAAG CTTCTAA
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| Protein sequence | MKTIGFAAES AHSPLQPYEY DCRPLREDDV AIEILYSGVC HSDLHTVNND WGWTVFPTVP
GHEIVGRVVE VGSQVSRYKV GDQVAVGCMV DSCQSCSQCH SGEEQFCEAG FTQTYNSVDR
HTQAITKGGF AKHIVVRQEF VLSIPKSLDL AKAAPLLCAG ITTYSPLRTW NVGPGSQVAI
IGMGGLGHMA IKLAVAMGAH VTVISRSQDK QGDALDLGAN DFLLSSEPES MELSANRFDL
ILDTVPVKHD ITPYLPLLKV DGTLTLVGQV GPIAEVNTVP MVMGRRRIAA SLIGGIAQTQ
EMLDFCAKMN ILPEVEMIKM EEINQAFERL ERADVRYRFV IDMQASSF
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