| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3047 |
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| Symbol | |
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| ID | 4922786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3619428 |
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| End bp | 3620495 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164657 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_001095172 |
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| Protein GI | 127513975 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CGCTAACCGC ATTAGCCCTG GCGACCCTGG TGGGATCGGC AGGCTTAGCC
TCTACCGGCG GTGCCATCGC CGCCACACCT GACTATCAAG CAGACCTCTC CCGAGGTGCC
AACAATTTCT ATCACAGCGA GCAACTCACC ATGAAAAAAG TGACCTTTAA GAATCAGTAC
AAGATGAATG TTACCGGCAA TCTCTACCTG CCTGGCAATA TCAAGCCCGG TGAGAAACGT
GCCGCCATCA TAGTCGGCCA TCCCATGGGC GCGGTCAAAG AGCAGAGCGC CGTGCTCTAT
GCCCAGCAAT TGGCCGAGCG TGGCTTTGTC ACCCTGGCGA TCGATCTCTC CTTCTGGGGC
GAGAGTGAAG GCGAGCCACG CAACGCCGTG TTACCCGACA TGTACGCCGA GGATTTTAGC
GCCGCCGTAG ACTTCTTAGG CACCCGCGAC TTCGTCGAGC GTGAGCGTAT CGGTGTGCTG
GGCGTGTGTG GTAGCGGCGG ATTCGCCATC AGCGCCGCCA AGATAGACCC TCGCATGAAG
GCCATCGCCA CAGTAAGCAT GTACGACATG GGCGGCTTTA GCCGTCACCT GTATGGCAAG
GTGCAAACCC TCGAGCAGCG CAAGCAGATC ATCGCCGCGG CGGCCGAGCA ACGTTACGTC
GAATTTACCG GCGGTGAGAC CCAATACACG GGCGGCACAC CCCATGAAGT AGATGAAAAC
TCTCACCCTA TCGCCAAAGA GTTTTACGAC TTCTATCGCA CGCCAAGGGG TGAATACACG
CCAGCAGGCT CGTCTCCCGA ACTGACGACT CACCCTACCT TGAGCAGCAA TACCAAGTTT
ATGAACTTCT ATCCCTTTAA CGACATCGAG TCTATCTCGC CGCGTCCACT GCTGTTTATC
GCTGGCGAGC ATGCGCACTC TATCGAGTTT AGCCAGGAAG CCTATGCCCT CGCCGCCGAG
CCCAAAGAGC TCTACCTGGT CGAGGACGCC GGCCATGTCG ACCTTTACGA CAGGGTCGAG
CTGATCCCCT TCGACAAGAT CAGCACATTC TTCACCAATA ACCTTTGA
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| Protein sequence | MKKTLTALAL ATLVGSAGLA STGGAIAATP DYQADLSRGA NNFYHSEQLT MKKVTFKNQY
KMNVTGNLYL PGNIKPGEKR AAIIVGHPMG AVKEQSAVLY AQQLAERGFV TLAIDLSFWG
ESEGEPRNAV LPDMYAEDFS AAVDFLGTRD FVERERIGVL GVCGSGGFAI SAAKIDPRMK
AIATVSMYDM GGFSRHLYGK VQTLEQRKQI IAAAAEQRYV EFTGGETQYT GGTPHEVDEN
SHPIAKEFYD FYRTPRGEYT PAGSSPELTT HPTLSSNTKF MNFYPFNDIE SISPRPLLFI
AGEHAHSIEF SQEAYALAAE PKELYLVEDA GHVDLYDRVE LIPFDKISTF FTNNL
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