| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3036 |
|---|
| Symbol | |
|---|
| ID | 4923017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3606539 |
|---|
| End bp | 3607366 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640164646 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095161 |
|---|
| Protein GI | 127513964 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCGAT GGCTAGCCTA TTCGGGGCGC CCCATTTTTT TGGATACCTT AGTGACACAG
CCGAGTCACT CGCTAGTGGC GCAGAGTCTA AACAGTGAGT TGAACATTAG CCCTGCGGGC
GTATTGCTCA GCACCAATGG CGATGGTTTT GGGATCGGCT GGTATAACAG ACGTGCCGAG
CCAGGCGTGT TTCGCGATGA TAAACCCGCC TGGCATGATG AGAATCTGAA AAATCTTTGC
CATCAGGTGG AGTCGCATAT TTTCTTTGCC CACATTCGGG CCACTACCAC TGGCGATGTG
CAACGCACTA ACTGTCACCC GTTTCAATTT AAAAACTGGC TGTTTCAGCA CAATGGTCAT
GTCAGCGATT TTGAGAAGAT CCGCCGAGAA CTCCAGCTGG ATATCGCACC CGAGTTGTAT
CCCTATCTGA GGGGGACTAC CGACAGTGAG ACTTTTTTTA TGTTGGCTCT CACCTATGGT
TTGCAAGAAA ACCCTAAGTT GGCGCTGCAA AAAATGGTCG AGCGAGTGCT GCAGGCCCTG
GAGCGGGTTA ATCCTAAGGG AGTGTTGAAT CTATCTTGTG CACTCTCCGA TGGTGACAGG
CTCTATACCC TAAGGTTTTC CCATAATGAG GAGGCGATGA CCCAGTTTTA CTCGTCGGAT
ACCGAGTGCA TCCAAGATTT TGATGATCAA TTTGAGCTGA TGCCACAGGG AAGTATTGTT
GTGGTTTCGG AACCTTTGGA TAAGGCCAGT GATAAGTGGA AACCTATCCC AGCCAACACC
TTTGCGACCA TAGAAGCGAA TCAGGTGAGT AGCGAAACCT TCTTATGA
|
|---|
| Protein sequence | MCRWLAYSGR PIFLDTLVTQ PSHSLVAQSL NSELNISPAG VLLSTNGDGF GIGWYNRRAE
PGVFRDDKPA WHDENLKNLC HQVESHIFFA HIRATTTGDV QRTNCHPFQF KNWLFQHNGH
VSDFEKIRRE LQLDIAPELY PYLRGTTDSE TFFMLALTYG LQENPKLALQ KMVERVLQAL
ERVNPKGVLN LSCALSDGDR LYTLRFSHNE EAMTQFYSSD TECIQDFDDQ FELMPQGSIV
VVSEPLDKAS DKWKPIPANT FATIEANQVS SETFL
|
|---|
| |