| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3016 |
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| Symbol | |
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| ID | 4923067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3581922 |
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| End bp | 3582716 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164626 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001095141 |
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| Protein GI | 127513944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCG CCATCATTCG CGGCCTGATC AAGCACGGCC ACAGGAGCGC ACATATCTTG
GTCTGTGCCC CCAGCCAGCG CACACGCAGC CGCCTGGTGC AGGATTTTAA TGTCAGGGTG
CACTCGGACA ACAGCGCCGC GGTGGCCTTT GCCGACATCA TCATACTGGC GGTGAAACCC
TTCATCGTCC CCTTGGTGTG TGACGAGTTA CGCCCCCTGC TTGGGCAAGT TAACAACGGC
AGAAGCGAGC AAAAATTGCT GATCTCCATC GCGGCAGGGC TAACCCATGC CAGCATTTCA
GACAAGCTGC CCCAAAATGT TCAGCTGGTC TGCGCCATGC CCAACCTGCC AACGGCCATC
GGCAAGGGAC TCACCGGCCT CTTTGTGCCG GGCCACCTGG ACAGACAGGC CGTCGATGAT
GCCGAGCAGT TGATGCGCGC CGTCGGCGAT ACCGTCTGGC TCGAGGATGA GCAGCAGATG
GCCAGCATAG TGGCTACTGC CGGCAGTTCG CCCGCCTACT TCTTCCTGTT TTTAGAGGCG
ATGGAGAAGG CCGCTATCGC CCAGGGGCTG CCAGCCAAGA CCGCCAGCAA GGCGGTGCTG
CAGAGCGCCA TGGGCGCCGT CTCTATGGCG ATGGCCAGCA AGGAGGGGCT CGCTAATCTA
CGCCATCAGG TCACCTCCCC TAAGGGCACC ACTGAGCAGG CGGTGCTGGC CTTTCAGCAT
GGGGATCTCG ATGCCTTAGT CGCCAGGGCG ATGGACAGCG CCGCCCGCCG GGCCAAGGAG
CTGGCGCTCG GCTAA
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| Protein sequence | MASAIIRGLI KHGHRSAHIL VCAPSQRTRS RLVQDFNVRV HSDNSAAVAF ADIIILAVKP
FIVPLVCDEL RPLLGQVNNG RSEQKLLISI AAGLTHASIS DKLPQNVQLV CAMPNLPTAI
GKGLTGLFVP GHLDRQAVDD AEQLMRAVGD TVWLEDEQQM ASIVATAGSS PAYFFLFLEA
MEKAAIAQGL PAKTASKAVL QSAMGAVSMA MASKEGLANL RHQVTSPKGT TEQAVLAFQH
GDLDALVARA MDSAARRAKE LALG
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