| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2995 |
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| Symbol | |
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| ID | 4923796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3554748 |
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| End bp | 3556001 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164605 |
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| Product | TonB family protein |
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| Protein accession | YP_001095120 |
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| Protein GI | 127513923 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGC TAATCGTTAA TCTGATGCTG CCGCTAACCC TGCTGTGCGC GGTTATCCTG
TTGCTGCACA GGCCCCTGCT GGCGCGTCTT GGTGCCCACA ACACCTACAT GCTCTGGGCC
TCGGTGCCCT TGCTGTTGGC GGGCACACTA CTGGGTCTGC TGGTTCCCGC CAGGCTTGCC
AGCCCCTCGC TTGAGCAGCT ACAGCACTAT CGCGTGCTGG CCGGTGAGCT GTTATCCCAG
GGCGATAACC CGACACTAAA CCTAATATTG GCCAGCATCT GGCTGCTGGG CAGCCTGACA
CTGCTCGGCG CCCTGCTCTA TCAGGCGACT CAGCTTAAAC GCCTGAGCAA TCGAGCCGAA
GCGCTCGAGC TGCCGCAAGC ATTGAGCCAG GGTCCGCTAT CTCTGACAGG GCGCGAGACC
TCTCTGGTGA TCAAGTGCCA CCCAGAGATA GATTCCCCCA TGCTGGCGGG ACTGTTTAAG
CCAGTGATCT TGGTGCCGAC GGGTTTTACA CAGCTCGCCC CATCACAGCA GGCAGCGGTA
CTCAGCCATG AGCTTAAGCA TCTTACCCGC CACGACATAG CAGCCAACCT CTTTGGCTAC
CTGCTGGCAA CGCTGTTTTG GTTCAACCCT GTGTGCTGGC TGGCCTATCG TCGTTTTCGT
GACGATCAGG AGCTAGCCTG CGATGCAGAG GTGATCACCC ACATGGATAA ACAACAAAGA
ATTGCCTATA GCCAAACGCT ATTGGCCTAC TCCCAGCAGG CCCACCTGGG CATGCTACAC
ACTCACTATG GAAACAAGAC CATCCTCAAG GAGCGGATCA TGCAAATGAA GAAAACACAC
ACCAAGCGGC CCCTCGCCAT TTTAGGTCTG GCACTCACAC TGGGCCTGTC GGGCGCCTTA
ATCAACCAGA GCGCCATCGC GGGCGACAAG CATAATGATG AACACCACGA CAAGGCCAAG
GCCCCAAGCC CTGTGATGCG CATCGAGCCA GCCTATCCGG CCGAGGCGGC GAAACAAAGT
GTCGAGGGCT ATGTGCAGCT AGCCTTTGAT ATCGACAAGC AGGGCAAAGT CAGTAATGTG
TCTGTTATCG AATCATCCCC TGCCGGTGTG TTTGACGTCG AAGCCGTTAA GGCGCTGAGT
CAGTGGCGCT ATGAAGCCTC GCCCGAGGGC GTCAGCCAGG CTAAGGTACA GCTGGATTTT
ATGATGTCGG CGCCTAAGGC TGAGATCGAA AGAGTTCGGG TCACCGCCGG CTAA
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| Protein sequence | MISLIVNLML PLTLLCAVIL LLHRPLLARL GAHNTYMLWA SVPLLLAGTL LGLLVPARLA
SPSLEQLQHY RVLAGELLSQ GDNPTLNLIL ASIWLLGSLT LLGALLYQAT QLKRLSNRAE
ALELPQALSQ GPLSLTGRET SLVIKCHPEI DSPMLAGLFK PVILVPTGFT QLAPSQQAAV
LSHELKHLTR HDIAANLFGY LLATLFWFNP VCWLAYRRFR DDQELACDAE VITHMDKQQR
IAYSQTLLAY SQQAHLGMLH THYGNKTILK ERIMQMKKTH TKRPLAILGL ALTLGLSGAL
INQSAIAGDK HNDEHHDKAK APSPVMRIEP AYPAEAAKQS VEGYVQLAFD IDKQGKVSNV
SVIESSPAGV FDVEAVKALS QWRYEASPEG VSQAKVQLDF MMSAPKAEIE RVRVTAG
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