Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2992 |
Symbol | |
ID | 4923793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3551977 |
End bp | 3553278 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640164602 |
Product | amidohydrolase |
Protein accession | YP_001095117 |
Protein GI | 127513920 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA ATACTCTGCT CCCCCTCGCC GCACTGACGG CTGCTCTCTT GTCGCCATCC CTGTTTGCCA ATGATGTGAC AGTGATCCAT GCCGGCACCC TGCTGGCCGA CCCGGCCGCC AAGCCGCTCA GCGAACAGAC CCTAGTGATC ACCGACGGTA AGATTAGCCA GGTTGCCCCC GGTTATCTGA GCGTCGAGAC CGTCGCGCCC GGCGCCAAGT ATGTGGATCT CAAGCAGGGC TTTGTGATGC CGGGTCTGAT GGATATGCAT GTGCATCTAC AAGGTGAGCT AGGGCCCAAG AATGATAGCC AGCGCCTTAG GATGTCAGAC GCCGATGTGG CGATGCAGAG CGCCTATTTC GCCAATAAGA CCCTGATGGC GGGCTTTACC ACGGTTAGGG ATCTCGGCGC CAAGCCGGAG CAGATGTATG CCCTGCGCGA TGCCATTGCA AAGGGGTGGA TAGACGGGCC GCGGATCATC GCCTCGGGCG GGGTGTCGGT GACCGGCGGT CATGGCGATG TGGATGGCAT GAGCCCAGAT CTGCTGGATA AGTTCACCAC TAAGACCATC TGCGACGGCC CCTATGACTG TCGCCGTGCC ACTCGCCGCG CCATCAAGTT TGGTGCCGAT GTTATCAAGA TCACCTCTAC CGGCGGCGTC TTGTCGGATA CCGACACGGG CACGGGCCAG CAGATGAACG ACGATGAGAT CAAAGAAATT GTAGCGACGG CCCATGCCCT GGGGCGTAAG GTGGCCAGCC ATGCCCATGC GACAGAGGGG ATCAACGCCG CCCTGCGCGC CGGGGTCGAT AGCATAGAGC ACGGCAGCTA CGCCGATAAG GAGAGCATCA AGCTACTCAA GAAGAATGGC GCCTTCCTAG TGCCCACCCT GTTGGCGGGC GATACCGTGG TGCATATGGC CAAGGAGTCT GACTTCATGT CGCCGGCCAT CAAGCAGAAG GCGGTGCGAG TGGGCGCCGA TATGACGGCT AACTTTACCC GCGCCTATAA GGCCGGGGTC AAGATTGCCT ATGGTACCGA CAGCGGCGTC TCGGCCCACG GCACCAATGC GCGAGAGGCG GTGTTGATGA ATCAGGCGGG CATGAGCAAT AAAGATGTGC TGATCTCGGC CACCATCAAC GGCGCAGAGC TAGTGGATAT GTCAGATAGC CTGGGCACCC TGAGTGTCGG CAAGCAGGCC GATATTATCG CGACCCAGGG CAACCCGCTG GAGGATATCT CGGCCCTGCT GGATGTGGGC TTCGTGATGA AAGGCGGCAA GGTGGTGAAG TCGCGCCTGT GA
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Protein sequence | MKNNTLLPLA ALTAALLSPS LFANDVTVIH AGTLLADPAA KPLSEQTLVI TDGKISQVAP GYLSVETVAP GAKYVDLKQG FVMPGLMDMH VHLQGELGPK NDSQRLRMSD ADVAMQSAYF ANKTLMAGFT TVRDLGAKPE QMYALRDAIA KGWIDGPRII ASGGVSVTGG HGDVDGMSPD LLDKFTTKTI CDGPYDCRRA TRRAIKFGAD VIKITSTGGV LSDTDTGTGQ QMNDDEIKEI VATAHALGRK VASHAHATEG INAALRAGVD SIEHGSYADK ESIKLLKKNG AFLVPTLLAG DTVVHMAKES DFMSPAIKQK AVRVGADMTA NFTRAYKAGV KIAYGTDSGV SAHGTNAREA VLMNQAGMSN KDVLISATIN GAELVDMSDS LGTLSVGKQA DIIATQGNPL EDISALLDVG FVMKGGKVVK SRL
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