Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2991 |
Symbol | |
ID | 4923792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3551485 |
End bp | 3551835 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640164601 |
Product | hypothetical protein |
Protein accession | YP_001095116 |
Protein GI | 127513919 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0349732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATT TTATTGGTGC GTTGAAGAAG TTTGCTGATT TCACCGGTCG TGCACGTCGC AAAGAGTTTT GGATGTTTAC CCTGTTCTAC ATCATCTTCT ATGCCGTGGC GGCAACTATA GATGTGGTAA CAGGTCTGTA TATGCTGAGC GGTATCTTTT CGCTGGCACT GCTTATCCCA ACTCTCGCTA TCTCGGCCAG ACGCCTACAC GACACCGGCC GTTCGGGCTG GTGGCAGCTG ATAGGTTTAA TCCCGCTTAT CGGGGCTATC GTGCTGATCG TCTTCTATGT ACAAGACAGC GTTGAAGGCA ACGAGTATGG TGAAAACCCT AAGGCTTTGG CCGAGGCGTA A
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Protein sequence | MEYFIGALKK FADFTGRARR KEFWMFTLFY IIFYAVAATI DVVTGLYMLS GIFSLALLIP TLAISARRLH DTGRSGWWQL IGLIPLIGAI VLIVFYVQDS VEGNEYGENP KALAEA
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