Gene Shew_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2991 
Symbol 
ID4923792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3551485 
End bp3551835 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID640164601 
Producthypothetical protein 
Protein accessionYP_001095116 
Protein GI127513919 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0349732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATT TTATTGGTGC GTTGAAGAAG TTTGCTGATT TCACCGGTCG TGCACGTCGC 
AAAGAGTTTT GGATGTTTAC CCTGTTCTAC ATCATCTTCT ATGCCGTGGC GGCAACTATA
GATGTGGTAA CAGGTCTGTA TATGCTGAGC GGTATCTTTT CGCTGGCACT GCTTATCCCA
ACTCTCGCTA TCTCGGCCAG ACGCCTACAC GACACCGGCC GTTCGGGCTG GTGGCAGCTG
ATAGGTTTAA TCCCGCTTAT CGGGGCTATC GTGCTGATCG TCTTCTATGT ACAAGACAGC
GTTGAAGGCA ACGAGTATGG TGAAAACCCT AAGGCTTTGG CCGAGGCGTA A
 
Protein sequence
MEYFIGALKK FADFTGRARR KEFWMFTLFY IIFYAVAATI DVVTGLYMLS GIFSLALLIP 
TLAISARRLH DTGRSGWWQL IGLIPLIGAI VLIVFYVQDS VEGNEYGENP KALAEA