Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2984 |
Symbol | |
ID | 4923825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3540273 |
End bp | 3541823 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640164594 |
Product | ferredoxin-dependent glutamate synthase |
Protein accession | YP_001095109 |
Protein GI | 127513912 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0069] Glutamate synthase domain 2 [COG3369] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTAAAC CCGTCATCGC CGATAACAAG CCCAAAAAAG TCGAGCTAAC CAAAGGAAAG GAATACTATT TCTGTGTCTG CGGCCGCTCA AACAGCCAGC CCTTCTGCGA TGGTTCCCAC AAGGGAACGG GATTTAGCCC CAAGGCCTTT ACCGCCGAGC GAAGCGGCGA GGCCTACCTT TGCGCCTGTA AACACACGGG CAATGCCCCC TACTGCGACG GCACCCACAA ACAGTTTAGC GCCGAACAGG TGGGCAATGA GGGCCCGGGC CGCGAGGCGA TCGCCAAAGA GGGCAACCAG GCTCCCAAGG CGGTCGCCAC CAAAGAGGAG CCCGGCGTCG AGTTGATCCA TCAGCTCGCT AGGGATGGAC TCAAAACACT CGGCCATCAT GGTCCCATGG TCGCCATGGG GGTGCCCAGA TATCAGCTGC CCAGCTGGGA TGAGATTCAG ATCATGACGG CCCAGATGGC CAACAAGCCC CTGTTCGAGG AGGAAGCGGT CGACACCGAG CTGATCATAG GCCCGGAGGC GCGAAAGCCC CTGAGGCTGA AGATCCCCCT GCTGGTGTCA GACATGAGCT TCGGCGCCCT GTCGGAAGAG GCCAAGGTCG CCCTGGCCAA GGGGGCCGAA CTTGCGGGTA CCGGGATCTG CTCCGGCGAG GGCGGCATGT TGCCCGAGGA GCAGGCGGCC AACTCACGTT ACTTCTACGA GCTGGCCAGC GCCCAATTTG GCTATCAGGA AGCCTTGATG GCCAAGATAC AGGCGTTTCA CTTCAAGGGC GGCCAAGGCG CCAAGACAGG CACAGGCGGC CACCTGCCGG GCAGCAAGAA CCAGGGCAAG ATAGCCCAGA TCCGCGGTAT TCCAGCGGGC CAAGATGCCA TCTCGCCGCC AAGGTTTAGG GAGCTCAACT CTGTGGCCGA CTTTAAACGC TTCGCCGATA GGGTACGTGA ACTCAGCGGC GGCGTGCCTA TCGGCTTTAA GCTCAGCGCC AACCATATCG AGCGGGACAT TCAGTTTGCA CTCGATGCCA GCGCCGATTA CATCATACTC GACGGCCGTG GCGGCGGTAC CGGCGCCGCG CCGCAGATCT TTCGCGACCA CATCAGTGTA CCCACCATCC CCGCCCTGGC TCGCGCCCGC CGCTACCTGG ATCAGCAAGG TGCCAGCGGC CGGGTGACGC TCATCATCAC AGGCGGCCTG AGGCTCCCCA TGGACTTCGT CAAGGCGATG GCACTGGGCG CCGACGGCGT TGCCCTGGCC AACAGTGCCA TGCAGGCGAT CGGCTGCGTC GCCGCCCGCA TCTGCAACAC CAACAACTGC CCCGCCGGTA TCGCCACTCA GAATGCCGAC TTGCGCCAAC GCCTCAACAT CGACAAGTCG GCGCAGCAAC TGGCCAACTT TCTGGGCGCC TCCACCGAGC TTATGCAGGT GATGGCCAGG GCCTGTGGCC ATCATCGCCT GCAGGACTTT ACCCTGGACG ATCTCGCCAC CTGGCACAGC GAGATGGCAA GGCTCTCCGG CATCTCCTAC GCAGGCGTGA CACCGATTTA A
|
Protein sequence | MVKPVIADNK PKKVELTKGK EYYFCVCGRS NSQPFCDGSH KGTGFSPKAF TAERSGEAYL CACKHTGNAP YCDGTHKQFS AEQVGNEGPG REAIAKEGNQ APKAVATKEE PGVELIHQLA RDGLKTLGHH GPMVAMGVPR YQLPSWDEIQ IMTAQMANKP LFEEEAVDTE LIIGPEARKP LRLKIPLLVS DMSFGALSEE AKVALAKGAE LAGTGICSGE GGMLPEEQAA NSRYFYELAS AQFGYQEALM AKIQAFHFKG GQGAKTGTGG HLPGSKNQGK IAQIRGIPAG QDAISPPRFR ELNSVADFKR FADRVRELSG GVPIGFKLSA NHIERDIQFA LDASADYIIL DGRGGGTGAA PQIFRDHISV PTIPALARAR RYLDQQGASG RVTLIITGGL RLPMDFVKAM ALGADGVALA NSAMQAIGCV AARICNTNNC PAGIATQNAD LRQRLNIDKS AQQLANFLGA STELMQVMAR ACGHHRLQDF TLDDLATWHS EMARLSGISY AGVTPI
|
| |