| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2981 |
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| Symbol | |
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| ID | 4923822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3535567 |
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| End bp | 3537531 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164591 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001095106 |
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| Protein GI | 127513909 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATC TTAATTTCGT TGTTGCGGTA GCTTCACTCG TTATTGCACT GCCGTCGCTG
GCTGCAACCC AGGCCAAGCC TGCGACGCCC CACACCCAGA AGGCCAATGC TGCGGTTCTC
AAAGAATTGC CATTTCAAGA TAAACAAGAC TTTGAAAATG CCAAGCGGGG CTTTATGGCA
AAGCCTGATG TCGTCACCAT TAAAGACGCT AAGGGAAATG TTGTTTGGGA TCTTGAGCAG
TATAAAACCT ATATTGCAGA CGATAAGTCA GCACCTGATA CGGTCAACCC CAGCCTATGG
CGCAATGCCC AGCTTGGAAT GCACCACGGC TTATATCAGG TGACAGAGGG GATCTATCAG
ATACGTGGCT TCGATCTTAC CAATATCACT TTCATCAAGG GGGACAAGGG CTGGATTGTT
TTTGATCCGC TCATTTCACC TGAGACCGCC AAGGCGGCCC TCGATTTTAT CAACCAGGAA
GTCGGTACAC GTCCCGTGGT GGCGGTTGTT TATAGCCATA GCCATATCGA TCACTATGGC
GGTGCAACTG GACTGGTCAG CTTGGATGAG GTTGAGTCGG GCAAGGTGTC TATCATAGCC
CCCGAGCATT TTACCGAGCA TGCGGTATCG GAGAACGTGA TCGCGGGCAA CGCCATGGGA
CGGCGCGCCG TCTATATGTA TGGTGCCCTC TTACCACGTA ATGCCAAGGG CGGCGTAAAT
GGCGGCCTGG GGATGACGGT ATCCACAGGA TTGGCCGGAC TGCTGCTACC CACCCATGAG
ATCACCAAGA CAGGCGAAAG GTTGACCATA GATGGCATTG ATATGGTATT TCAATTGACG
CCGGGCAGTG AGGCGCCTGC GGAGATGAAC ACCTGGTTTC CTCAAGCTAA GGCTCTGTGG
ATGGCCGAGA ACACCACAAA TACCATGCAC AACATCTTAA CCCTAAGGGG CGCGCAGGTG
AGGGATGCAC TCATTTGGTC GAGTTTTCTG GATGAGACTA TTGACCTCTG GGGAGATCAG
GCTGAGGTGA AGTTTCAGAG TCACCATTGG CCAATGTGGG GCAATGACAA GATTATTCCC
TACTTCAAGA AACAACGAGA TATCTATAAG TTTACCCATG ATCAATCTGT GCGTCTGATG
AACCAAGGTT TCACCGGGGA AGAGATTTCG GAGATGATTT CACTGCCAAA AGAGCTGGAA
CAGAGTTGGT CTACCCGCGG TTACTACGGT ACCTTGCGTC ACAACAGTCG CGCCGTCTAT
CAGCGTTATA TGGGATGGTA TAACGGCAAT CCGGCTAACC TTAACAATCT GCCGCCAGAA
GCCGTCGCTA AGAAATATGT TCAGTTTATG GGGGGCGAAG CTGAGGTCAT CCGTAAGGCG
AGAGCCTCCT TTGATGAGGG GGAATACCGT TGGGTAGCAG AGGTGATGAA GCATGCCGTA
TTTGCCAACC CCAAAAGCAT CGACGCTAAA GAGTTGTTAG CCGACGCGTT AGAGCAGCTT
GGGTATCAGG CTGAATCTGG CCCGTGGCGC TCAGTATACC TGCAAGGGGC ATATGAGCTG
AGAAATGGTG TCCCGGCGGC CGGTGGAACA CAAACGGCCA CGCCCGACAC GATCCGAGCC
ATGACTCCCG AGATGTTGTT TGACTATCTG GCAGTGAGAC TAGATGCCGC CAAGGCGGAA
GGAAAGCAGT TTGATATAGA GATCGCCTTT TCCGATCTCG ACAGCCTTTA TACCCTCACC
GTTGAGAATG CGGTGTTGCA TCACAGCAAA CGTAAGGTGG AGCAACCCGA TGTTAAGCTG
GTCATGAGCA TGAAGACCAT GAACAGCATT CAATTGAAGG AGCTGAGTTT CGATGATGCG
ATTGCCAGCG GCGAGGTGAA GCTAACTGGC GATAAGGCCC TGTTTACCTC GTTCCTCGGG
ATGTTAGACG ACTTTAACTT CTGGTTTAAC ATCGTCATGC CTTAG
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| Protein sequence | MRHLNFVVAV ASLVIALPSL AATQAKPATP HTQKANAAVL KELPFQDKQD FENAKRGFMA
KPDVVTIKDA KGNVVWDLEQ YKTYIADDKS APDTVNPSLW RNAQLGMHHG LYQVTEGIYQ
IRGFDLTNIT FIKGDKGWIV FDPLISPETA KAALDFINQE VGTRPVVAVV YSHSHIDHYG
GATGLVSLDE VESGKVSIIA PEHFTEHAVS ENVIAGNAMG RRAVYMYGAL LPRNAKGGVN
GGLGMTVSTG LAGLLLPTHE ITKTGERLTI DGIDMVFQLT PGSEAPAEMN TWFPQAKALW
MAENTTNTMH NILTLRGAQV RDALIWSSFL DETIDLWGDQ AEVKFQSHHW PMWGNDKIIP
YFKKQRDIYK FTHDQSVRLM NQGFTGEEIS EMISLPKELE QSWSTRGYYG TLRHNSRAVY
QRYMGWYNGN PANLNNLPPE AVAKKYVQFM GGEAEVIRKA RASFDEGEYR WVAEVMKHAV
FANPKSIDAK ELLADALEQL GYQAESGPWR SVYLQGAYEL RNGVPAAGGT QTATPDTIRA
MTPEMLFDYL AVRLDAAKAE GKQFDIEIAF SDLDSLYTLT VENAVLHHSK RKVEQPDVKL
VMSMKTMNSI QLKELSFDDA IASGEVKLTG DKALFTSFLG MLDDFNFWFN IVMP
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