| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2979 |
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| Symbol | |
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| ID | 4923820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3533864 |
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| End bp | 3535027 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164589 |
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| Product | putative iron-sulfur cluster binding protein |
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| Protein accession | YP_001095104 |
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| Protein GI | 127513907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC ATAGCCCCCT CTCGCCTCAA GCGTTACAGC AGCTCGCCCT CAAGATTAAA
ACCTGGGGCA AGGCGTTAGG CTTTGCGCAA ATCGGCATCT GCGACACGGA TCTTCGCGCC
GAAGAGCCCA AGTTTCAGGC CTGGCTCGAT AAGGGCTATC ACGGTGAGAT GGGCTACATG
GAGAGCCATG GCATGATGCG CGCGCGCCCA CAGGAGCTAC ATCCGGGCAC AGTGCGAGTC
ATCTCGGCGC GTATGGATTA CCTGCCGCCG GAGGCGGGTT TCGCCACCCA TCTCAAGGAC
CCCAACCTGG CCTATATCTC GCGCTATGCC GGTGGCCGTG ACTATCACAA GATGATCCGC
AATCGCCTGA AGAAGCTGGG ACAACAGATT GAAGCCGAGC TGGAAACCTT AGGGCTCGAA
CGCCCAAACT ATCGCCCCTT TGTGGATTCG GCGCCGATTC TGGAGCGCCC ACTGGCCGAC
AAGGCAGGAC TTGGCTGGAC AGGCAAACAT AGCCTGCTGC TCAATCACGA GGCCGGGAGC
TGGTTCTTCC TCGGTGAACT CCTGATCGAC CTGCCACTAC CAGTAGACAT TCCGGTGCAG
GCCGACTGCA ACACCTGCGT CGCCTGCATC AAGTCCTGCC CCACCAACGC CATCGTCGAG
CCCTATGTGG TGGACGGCAG ACGCTGCATC TCCTATCTCA CCATAGAGCT TCAAGGGGCG
ATCCCCGAAG AGTTCAGGCC TTTGATGGGC AACCGCATCT ATGGCTGTGA CGACTGTCAG
CTGGTGTGTC CGGTCAATGG CGAGGCGCCG CTGACCCAGG AGAGCGACTT CCACACCCGG
GATCCGCTCA AACATCCAGA GCTGCTCACC CTCTTCGCCT GGAACGAGGC CGAGTTTCTG
AAGTTTACCG AAGGGAGCGC CATCCGCCGT ATCGGCCACA AGCGTTGGCT GCGCAACATA
GCCATCGCGC TGGGCAATGC ACCGGCTTCA CAGGAGATCA TCGCCGCCCT CGAAGCACGC
AGGGAAAGCG ATGAGGTAGA TGAGATGGTG CGCGAGCATA TCGACTGGGC ACTGACGCGC
CAGAGGCTTG GCGACTATCA GGCCAACCGT AAAACACAGC GGGTGATCCG CACCGTCGAG
AAGGGACTCC CCAGAGACGC CTAG
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| Protein sequence | MSDHSPLSPQ ALQQLALKIK TWGKALGFAQ IGICDTDLRA EEPKFQAWLD KGYHGEMGYM
ESHGMMRARP QELHPGTVRV ISARMDYLPP EAGFATHLKD PNLAYISRYA GGRDYHKMIR
NRLKKLGQQI EAELETLGLE RPNYRPFVDS APILERPLAD KAGLGWTGKH SLLLNHEAGS
WFFLGELLID LPLPVDIPVQ ADCNTCVACI KSCPTNAIVE PYVVDGRRCI SYLTIELQGA
IPEEFRPLMG NRIYGCDDCQ LVCPVNGEAP LTQESDFHTR DPLKHPELLT LFAWNEAEFL
KFTEGSAIRR IGHKRWLRNI AIALGNAPAS QEIIAALEAR RESDEVDEMV REHIDWALTR
QRLGDYQANR KTQRVIRTVE KGLPRDA
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