Gene Shew_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2968 
Symbol 
ID4924062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3522536 
End bp3523171 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID640164578 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001095093 
Protein GI127513896 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.167267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTC TATATGGAAC CCCAAGAAGC CGCGCCCTGC GCGTCTCCTG GCTTTTGGAA 
GAATTAGCTA TCGACTGGCA ATTTCATTTC ATCAACTTTG CCAAAGGCGA CAACCGCAGC
GAGGCCTTTC TGGCCATGAA CCCTTGCGGC AAGGTGCCCG TCATAAAGGA CGATGACCTG
GTGCTCACCG AATCCGCCGC CATCTGCCAA TATCTGGCGG AAAAATATGG TCAGGGACAG
TTTCTGCCCA CACCCGGTAC ACCTGGGGCC GCTCATTACC ATCAGTGGAT GAGCTACATC
ATCTGCGAAC TGGAGCAGCC CCTGTGGACC ATGGGCAAGC ATAAGTTCGC CCTACCCGAG
GAGCACCGCC TGCCAGCCAT ACTGCCCACA GCGGTATGGG AGTTTAACAA GGCCGCCGCC
ATCGCCGAAC AGTGGCTGCC GGACAGCGAC TACCTGCTAG GAGATATCCC AACGGTTGCC
GATATCATGC TGGCCCATAC CCTGATGTGG GCGACGGTAT TTGAGCAGCA GCTCCCACCT
AAACTCGCCG CCTTCAGAGA CAGGATGAAG ACACGCCCGG CTCTAATCCG CGCGCTGGAA
AAAACCGAAG CCGTCGCCGC TCAGGCAGCA GAGTAG
 
Protein sequence
MITLYGTPRS RALRVSWLLE ELAIDWQFHF INFAKGDNRS EAFLAMNPCG KVPVIKDDDL 
VLTESAAICQ YLAEKYGQGQ FLPTPGTPGA AHYHQWMSYI ICELEQPLWT MGKHKFALPE
EHRLPAILPT AVWEFNKAAA IAEQWLPDSD YLLGDIPTVA DIMLAHTLMW ATVFEQQLPP
KLAAFRDRMK TRPALIRALE KTEAVAAQAA E