Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2968 |
Symbol | |
ID | 4924062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3522536 |
End bp | 3523171 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164578 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001095093 |
Protein GI | 127513896 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.167267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACTC TATATGGAAC CCCAAGAAGC CGCGCCCTGC GCGTCTCCTG GCTTTTGGAA GAATTAGCTA TCGACTGGCA ATTTCATTTC ATCAACTTTG CCAAAGGCGA CAACCGCAGC GAGGCCTTTC TGGCCATGAA CCCTTGCGGC AAGGTGCCCG TCATAAAGGA CGATGACCTG GTGCTCACCG AATCCGCCGC CATCTGCCAA TATCTGGCGG AAAAATATGG TCAGGGACAG TTTCTGCCCA CACCCGGTAC ACCTGGGGCC GCTCATTACC ATCAGTGGAT GAGCTACATC ATCTGCGAAC TGGAGCAGCC CCTGTGGACC ATGGGCAAGC ATAAGTTCGC CCTACCCGAG GAGCACCGCC TGCCAGCCAT ACTGCCCACA GCGGTATGGG AGTTTAACAA GGCCGCCGCC ATCGCCGAAC AGTGGCTGCC GGACAGCGAC TACCTGCTAG GAGATATCCC AACGGTTGCC GATATCATGC TGGCCCATAC CCTGATGTGG GCGACGGTAT TTGAGCAGCA GCTCCCACCT AAACTCGCCG CCTTCAGAGA CAGGATGAAG ACACGCCCGG CTCTAATCCG CGCGCTGGAA AAAACCGAAG CCGTCGCCGC TCAGGCAGCA GAGTAG
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Protein sequence | MITLYGTPRS RALRVSWLLE ELAIDWQFHF INFAKGDNRS EAFLAMNPCG KVPVIKDDDL VLTESAAICQ YLAEKYGQGQ FLPTPGTPGA AHYHQWMSYI ICELEQPLWT MGKHKFALPE EHRLPAILPT AVWEFNKAAA IAEQWLPDSD YLLGDIPTVA DIMLAHTLMW ATVFEQQLPP KLAAFRDRMK TRPALIRALE KTEAVAAQAA E
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