Gene Shew_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2963 
Symbol 
ID4924057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3515883 
End bp3516347 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID640164573 
Producthypothetical protein 
Protein accessionYP_001095088 
Protein GI127513891 
COG category[S] Function unknown 
COG ID[COG4807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA ACGATATTTT ACGCCGTCTA CGATTCGTAT TCGATTACAA GAATGCCAAG 
ATGATCAAGA TCTTCGCCAA GGTCAAACAT GAGATGAGCC AGGAAGTCCT GCTCAACATG
CTCAAGAAAG AGGCCGAAGA GGGCTATAAG CCCTGTAACG ACAAGACCTT GTGCCTGTTT
CTGGATGGCT TGATCATCGA AAAGCGCGGC CTGCGCGATG GGGCAGAGAT CCCCGCTCCC
GTATCTCAGT TAAACAACAA TCTGATCTTC AAGAAGCTGA GGATCGCCCT TGAGATGCGC
GAAGAGGATA TCATCGAGAC CTTAGCCCTG GCGGACTTCA GAATGACGAG TTCCGAGCTG
GGTGCTCTGT TTAGAAAACC CGGCCATAAA CACTTTAAGG AGTGTGGCGA CCAGGTGCTG
CGTAACTTCT TGATGGGTCT GTCGATCAAG TATCGCGGTA AGTAA
 
Protein sequence
MINNDILRRL RFVFDYKNAK MIKIFAKVKH EMSQEVLLNM LKKEAEEGYK PCNDKTLCLF 
LDGLIIEKRG LRDGAEIPAP VSQLNNNLIF KKLRIALEMR EEDIIETLAL ADFRMTSSEL
GALFRKPGHK HFKECGDQVL RNFLMGLSIK YRGK