Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2963 |
Symbol | |
ID | 4924057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3515883 |
End bp | 3516347 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640164573 |
Product | hypothetical protein |
Protein accession | YP_001095088 |
Protein GI | 127513891 |
COG category | [S] Function unknown |
COG ID | [COG4807] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATA ACGATATTTT ACGCCGTCTA CGATTCGTAT TCGATTACAA GAATGCCAAG ATGATCAAGA TCTTCGCCAA GGTCAAACAT GAGATGAGCC AGGAAGTCCT GCTCAACATG CTCAAGAAAG AGGCCGAAGA GGGCTATAAG CCCTGTAACG ACAAGACCTT GTGCCTGTTT CTGGATGGCT TGATCATCGA AAAGCGCGGC CTGCGCGATG GGGCAGAGAT CCCCGCTCCC GTATCTCAGT TAAACAACAA TCTGATCTTC AAGAAGCTGA GGATCGCCCT TGAGATGCGC GAAGAGGATA TCATCGAGAC CTTAGCCCTG GCGGACTTCA GAATGACGAG TTCCGAGCTG GGTGCTCTGT TTAGAAAACC CGGCCATAAA CACTTTAAGG AGTGTGGCGA CCAGGTGCTG CGTAACTTCT TGATGGGTCT GTCGATCAAG TATCGCGGTA AGTAA
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Protein sequence | MINNDILRRL RFVFDYKNAK MIKIFAKVKH EMSQEVLLNM LKKEAEEGYK PCNDKTLCLF LDGLIIEKRG LRDGAEIPAP VSQLNNNLIF KKLRIALEMR EEDIIETLAL ADFRMTSSEL GALFRKPGHK HFKECGDQVL RNFLMGLSIK YRGK
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