| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2955 |
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| Symbol | |
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| ID | 4924092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3503518 |
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| End bp | 3504462 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164565 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001095080 |
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| Protein GI | 127513883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0527705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTTA TCGATGCCGA AGCGGTGCAC CAGGCACTGG ACTTCCCCAG TCTCACCGCC
GCCCTAAGAG ACACCTTTGC CCAGCCCGCC GGAATGCCCC AGCGCCAGGT CTTTCCGTTA
GACGACAGTA GCCACAGCGA TGCCTTTGCC GTATTGCCGG CCTGGAACCA GAAGACCATA
GCGGTCAAAG CCTTCACCTA TTTTCCCGGC AATCCTAAGA AGTCTCCCGA ACTTGAGAGC
CTCTACTCCA AGATTTTGAT CTTCAATCGC GAAACCGGTG AGCCCCAGGC CCTGGTCGAT
GGCACCAGCG TCACCTACTG GCGCACGGCC GCAATCTCGG CACTAGCGAG CCAGTATCTG
TCACGGTCTG ATGCCAAGCA TCTGCTGCTG TTTGGTACGG GACGCCTGGC GACCTTTATG
GCATTGGCGC ATGCCAGCGT GAGGCAGCTA AAAACTATAA CAGTATGGGG CCGCTCGCCG
GATAAGGTTG ATAAGACCAT CAGCGCTATC CAGGCCGCCG CGCCGCAGAT AGAGGTGAAG
GCCTGTGAGG ATCTGCCAAA GGCCGTCGCC GCGGCCGACA TCATCAGCTG CGCCACCGGG
GCGCCAGCGC CACTCTTCGA TTCCGCCTGG GTCGCGCCCG GCACCCATGT GGACTTGGTA
GGCAACCACA ATCATGACAG ACGCGAATGC GACAGCGAGC TGGTCGTCAA GGCCGAGGTT
TATGTGGATG CCAAGGTCAA TGTCTTCGCC GAGGCGGGCG AGCTGCTGAT CCCTGTGTCG
GAAGGCGTGT TTGAGCTTTC CCAGGTCAAG GGCGAATTGG CAGACCTCTG CCGCGGTGAC
ATACCAGGTC GCCAAGGCGA ACAAGGCATT ACCCTGTTTA AATCGGTCGG CACCGCTCTT
GCGGATCTGG TGGGTGCCCA GCTAGTATAC GAAAAACAGG CCTAG
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| Protein sequence | MQVIDAEAVH QALDFPSLTA ALRDTFAQPA GMPQRQVFPL DDSSHSDAFA VLPAWNQKTI
AVKAFTYFPG NPKKSPELES LYSKILIFNR ETGEPQALVD GTSVTYWRTA AISALASQYL
SRSDAKHLLL FGTGRLATFM ALAHASVRQL KTITVWGRSP DKVDKTISAI QAAAPQIEVK
ACEDLPKAVA AADIISCATG APAPLFDSAW VAPGTHVDLV GNHNHDRREC DSELVVKAEV
YVDAKVNVFA EAGELLIPVS EGVFELSQVK GELADLCRGD IPGRQGEQGI TLFKSVGTAL
ADLVGAQLVY EKQA
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