| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2942 |
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| Symbol | |
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| ID | 4924079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3481018 |
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| End bp | 3481983 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164547 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001095067 |
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| Protein GI | 127513870 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000018983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00758797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGGC CTGAAAGATT ACAACCCGGA GTCAAGTTAC GCGATGCCGA CAAGGTCTCT
CGTATTCCGG TCAAGGTCGT GCCTTCCGAG CGCGAAACCA TGCTACGCAA ACCCGATTGG
TTGAGAGTCA AGCTCCCGGC ATCGAATCAA CGTATCGTCG ACATCAAACA AGCGCTGCGT
AAGAACGGTC TGCACTCTGT ATGTGAAGAG GCCTCCTGCC CTAACCTTGC CGAATGTTTT
AACCATGGTA CCGCTACCTT CATGATCTTG GGCGCCATCT GCACCCGTCG CTGCCCCTTC
TGCGACGTGG CCCATGGTCG TCCACTCAAG CCTGATGCCG AAGAGCCGGT AAAACTGGCA
CAAACCATCA GAGACATGAA GCTGAAATAT GTGGTGATCA CCTCTGTGGA TCGTGACGAT
CTGCGTGATG GTGGTGCCCA GCACTTTGCC GACTGTATTC GCGAGATCCG TAAGCTCAAC
CCAGAGATCA AGATTGAGAT CTTGGTGCCC GACTTTAGGG GCCGCATCGA CGCCGCCTTG
GAGATTCTGG CCACAGAGCC ACCCGATGTC TTCAATCACA ACCTGGAAAC TGCGCCTAAG
CACTACCGTA AGGCTCGTCC AGGGGCGAAC TACCAATGGT CACTGGATCT GTTGAAGAAA
TTCAAAGAAC AACACCCACA TATTCCGACT AAGTCGGGCC TGATGATGGG TCTGGGTGAG
ACCAACGAAG AGATCGCCGA GGTGCTTCGC GACCTGCGTG CGCACAATGT TGAGATGCTG
ACACTCGGTC AATACCTGCA GCCTTCTAAA TTCCACCTGC CGGTAGAGCG TTACGTGCCG
CCAGCCGAGT TTGACGAGCT GAAAGACTAT GCCGAAGAGA TAGGCTTTAC CCATGCCGCT
TGTGGTCCTA TGGTGCGTTC TAGCTACCAC GCCGACCTGC AGGCGCAAGG TAAAGAGGTT
AAATAA
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| Protein sequence | MSRPERLQPG VKLRDADKVS RIPVKVVPSE RETMLRKPDW LRVKLPASNQ RIVDIKQALR
KNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAEEPVKLA
QTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRKLN PEIKIEILVP DFRGRIDAAL
EILATEPPDV FNHNLETAPK HYRKARPGAN YQWSLDLLKK FKEQHPHIPT KSGLMMGLGE
TNEEIAEVLR DLRAHNVEML TLGQYLQPSK FHLPVERYVP PAEFDELKDY AEEIGFTHAA
CGPMVRSSYH ADLQAQGKEV K
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