Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2940 |
Symbol | |
ID | 4922142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3480004 |
End bp | 3480270 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640164545 |
Product | hypothetical protein |
Protein accession | YP_001095065 |
Protein GI | 127513868 |
COG category | [S] Function unknown |
COG ID | [COG2921] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000039404 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0192635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACA CCAAATTTCA TGAACTCCTA GACTTCCCCG CGGCCTTCCC TTTCAAAGTC GTGGGCGACG CCAGAGACAC ACTCGCCGAT GACGTCGTTG CCGTTGTGCA GCGTCACGTG CCAGGCGACT ATATGCCAAC CTCCAGGGCC TCAAGCAAAG GCAGCTACCA CTCGATCACC GTCAAGGTAA CGGTTCACAG TAAAGAGCAG ATCGAACTGC TTTACATCGA GTTAGCGGCT ATCGAAGGGG TTAAGCGCGT CCTCTAA
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Protein sequence | MLDTKFHELL DFPAAFPFKV VGDARDTLAD DVVAVVQRHV PGDYMPTSRA SSKGSYHSIT VKVTVHSKEQ IELLYIELAA IEGVKRVL
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