| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2934 |
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| Symbol | |
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| ID | 4922136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3473240 |
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| End bp | 3473710 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164539 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_001095059 |
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| Protein GI | 127513862 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000178909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00747753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGTTAC AACTCGTTGC CGTGGGCACT CGCATGCCCG CCTGGGTCAC CACAGGTTTC
GAAGAGTATC AGCGCCGTTT CCCCAGGGAC ATGGCGTTCG AACTGATTGA GATCCCTGCC
GGCAAGCGCG GTAAGAATGC CGACATCGCC CGCATCTTGC AAAAAGAGGG CGAACAGATG
CTGGCGGCTA TCCCTAAGGG AAACCATATC GTCAGCCTGG ATCTGCCGGG TAAAAACTGG
ACCACGCCCG AGCTTGCCAC TCAGCTCAAT CGCTGGCAAC TGGACGGTCG CGATGTTAGC
CTGCTTATCG GCGGCCCCGA GGGGCTGGCC CCCGCCTGCA AACAGGCGGC GAATCAAAGC
TGGTGTTTAT CGGCCTTGAC CCTGCCCCAC CCCTTGGTAC GCGTCTTGGT GGCCGAGAGC
CTATACCGTG CCTGGAGCAT CAACAACAAC CACCCGTATC ATAGAGAGTA G
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| Protein sequence | MKLQLVAVGT RMPAWVTTGF EEYQRRFPRD MAFELIEIPA GKRGKNADIA RILQKEGEQM
LAAIPKGNHI VSLDLPGKNW TTPELATQLN RWQLDGRDVS LLIGGPEGLA PACKQAANQS
WCLSALTLPH PLVRVLVAES LYRAWSINNN HPYHRE
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