| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2911 |
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| Symbol | |
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| ID | 4921372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3449202 |
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| End bp | 3450044 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164508 |
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| Product | HemK family modification methylase |
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| Protein accession | YP_001095036 |
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| Protein GI | 127513839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.931835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTTCCAGA CGTTAGCACA GGCCCTCGAA TGGGCCTCGA CTCGACTCCA GGATGTGTCT
GACAGTGCCA AGCTCGATGC CGAGGTGATG CTGCTGCATA TCATTCATAA GCAGCGCAGT
TATCTCTATA CCTGGCCAGA CGAGCGTCTG ACCAGCGAGC AGGTGACCGA GTATAAGCAG
ATGGTCGGTC GCCGCGAGTT AGGTACTCCC ATCGCTCACA TCGTCGGCGA ACGGGAGTTC
TGGTCGCTGC CCTTCATGGT TAATCCCACC ACGCTGATCC CGCGCCCGGA TACCGAGATT
TTGGTAGAGA CAGCCCTTAA TCTGCCGCTG GCGGAGAATG CTAAGGTGCT GGACCTGGGG
ACTGGTACCG GGGCTATCGC CCTGTCGCTG GCCTTCGAGC GTAGTAACTG GCAGATCACT
GCGGTAGACA AGGTGCTCGA GGCCGTTGCC CTGGCCAAGG CCAACCGTGA CAACCTCAAG
TTGCCTCAGG TGGAGGTACT GCAGAGTGAC TGGTTCGACG CCATCAATCG CTACGACTTC
AACCTGATCG TCTCCAATCC GCCCTATATC GATGAGGAAG ATGAGCACCT GTCCCAAGGG
GACGTGCGTT TCGAACCCCA TAGCGCGCTC ACCGCAGGTG AACACGGCTA TGCGGATCTC
TTCTACATCG CCGAGGCGGC GCGCGACTAT CTGGCGCCCG GTGGCTATCT GCTGCTTGAG
CATGGTTTCG GCCAGGCTCT TACGGTGCGC GATAAGATGA TCGAGCTGGG TTACGAGGCG
GTCGCGACGG TACGCGATTT TGGCAGCAAC GACAGATGTA CCCTGGGTCG CTGGCCAAGA
TAG
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| Protein sequence | MFQTLAQALE WASTRLQDVS DSAKLDAEVM LLHIIHKQRS YLYTWPDERL TSEQVTEYKQ
MVGRRELGTP IAHIVGEREF WSLPFMVNPT TLIPRPDTEI LVETALNLPL AENAKVLDLG
TGTGAIALSL AFERSNWQIT AVDKVLEAVA LAKANRDNLK LPQVEVLQSD WFDAINRYDF
NLIVSNPPYI DEEDEHLSQG DVRFEPHSAL TAGEHGYADL FYIAEAARDY LAPGGYLLLE
HGFGQALTVR DKMIELGYEA VATVRDFGSN DRCTLGRWPR
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