| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2907 |
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| Symbol | |
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| ID | 4921368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3446756 |
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| End bp | 3447142 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640164504 |
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| Product | invasion gene expression up-regulator, SirB |
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| Protein accession | YP_001095032 |
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| Protein GI | 127513835 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.493009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.817295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGTT TATACCCAGC TATTAAGCAT ATACACCTCA CTTTGATTGC CGTGAGTGTG
CTGTTTTTTA TCGTACGATT TGTGCTGCAT CTTAAACAAT CAGCCATCAT GGACAAGAAA
TTTGTTAAGA TTGCGCCCCA TGTGATCGAT ACCTTCCTGC TGCTCTCCGG CCTAACCTTA
TGCTTCATCA TCAAGCAGTA TCCGTTTCAG GATGCCTGGT TGACCGAGAA GATAGGCGCA
GTGATCGCTT ACATCTTCCT GGCGGCCATC TCGCTTAAGG CTAACCGTAA CAAACTCTTC
AAGACCTTCG CCGCCCTAGG CGCGCTGGCC TGGGTGATGT ACGCTGCGAA AATTGCCATG
TTTAAACAAG CAATATTAAT GAGCTAA
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| Protein sequence | MDSLYPAIKH IHLTLIAVSV LFFIVRFVLH LKQSAIMDKK FVKIAPHVID TFLLLSGLTL
CFIIKQYPFQ DAWLTEKIGA VIAYIFLAAI SLKANRNKLF KTFAALGALA WVMYAAKIAM
FKQAILMS
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