| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2900 |
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| Symbol | |
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| ID | 4921361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3438008 |
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| End bp | 3439999 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164497 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095025 |
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| Protein GI | 127513828 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3930] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02421] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0409869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCT ATAGTCTCGA CCAGATGCTC TCCCTGATTA AACGCGGGGA GACATTCTCA
GGCCAACTGG CCTCCTCCGG CTGTGTGATA ACCATCCAAG AGTATCTGCC CGTAGTGTGC
ACCGCGATTC ACGCGGGGCA CAACCTGCGC CCTGAGCTGA TCAAATTATG TCAGCTGAGC
GCAGAGGAGC GTTACTTCGA GGAAGATCCC TTCACCGACG AGGTGATCGC CTCCCAGCCT
ATTACCCTGG CCGGCAGCGA CTCGCGCTTC GAGTACGATC TCAATCGCCC TAAGAGCTTG
AGTACCTACT ACAAGTCCGC CTGGATGAAG CAGGTGTGGC GCAAGCCGCT AAGTGCCAAG
CAGCGCGCCA TCAGCCATGC CAAACACCAG GATTTCTATC GACTCTACGA GGCGCTGATC
GCCAAGTTGG AGAGCATGTT CGGCATGGTG ATCGTGTTCG ACCTGCACTC CTACAACTAC
AAGCGTATCG AGAAGGCGAC CCCCGTGTTT AACATAGGCA CCTCGCAGAT CGATATGGAG
CGCTGGGGCA GCGTGGTCCA CAAGTTCCAG CGTGAACTCA AGACCATCAC CCTGCCCAAC
GTAGAGGTGG ACGCCGAGCT GGACGTGGCC TTCGAGGGCC GCGGCTACCT GATCGCCCAC
ACCAACGCCC GCTTCGACCG CACCTTAGTG CTGCCGACGG AGATCAAGAA GGTTTTTATG
GATGAGTTGA CCGGCGAGGT CTACCCCATA GTGCTGGACG ATCTCAAGCT GGGACTTAAG
AACGCCTTTA GCGCCACCAG CGCCTACTTC CAGCGCAAGC TCAATCGCCA GAGCAAGACC
CGTAGCGCCG ACATGCTCAG CAGCGCCATC GAGCCCGAGG TGCTGGAGAT AGACGCCGCC
CTGTTCCGCC TGGCACAGAA GGTCGACACG CTGAAGTATG TCAACCCGAC CAACCTGGCG
GCCGAGCGTC GACGCTTCAT GAAGGCGCCG AGTCGTTTCA AGCCAAATTT TGCCTATCGT
CAGCTGCCTA TCGATGCCAA CGAGTTCAAG TATCGTCTCT ATCGTCTGCC CATAGACAAT
ATTGCCGATC CCGCGCTTAA GCAGCTCTAC AAGGATATCG TTAACAAGCT GGGCGAACAG
ATAGATCTCC TGACCAGCGT CGGTCAGGAA GGCTTCGTCT ACAACTCGCT GCGTTATCAT
GGCCGCCCGG ATAAGAGTGC CATCGCCAAC GCCAAGTTCC TGCTGTACGC CAAGGAGATC
CCCGAAGAGA GAGGGGAAAG CCTGGATGCC CATCAGGTGT GCGAGATGAT GAAGCAGAGC
GCCGAGCAGT GGCAGATGCG CTGTAAGATT GGCCTCAGCG GCGCCATCGT TGCCCGCGCC
ATGGTCTGCT CCAATCCGGC GCAGCTGGCG ATCAGCACCC ATGCCCAGTT CCACGAGAGT
GAGGTGCAGC GGCTGATCCA ACATGAGCTT GGGGTACACA TGGCCACCAC GCTCAACGCC
AAGCAGCAGT CGCTTAAGGT GTTGCGTCTG GGTCTACCCG GCTCGACCTA TACCCAGGAA
GGTTTGGCGA TTCTGGCGGA GCTTAAGGCG GGCTTCATGG CCCACTCACG CCTCAACACC
CTGGCGGCGC GCGTGCTGGC GGTAGACTCA ATGCTCAAGG AGCAGGACTT CTATCTCACC
TACAGCTATC TCATCGATGA GCTGGAGATG GACAAGGATG ATGCCTTCAT GACCACGGCC
CGCGTCTATC GCGGCGGCGG CTTCACTAAG GATCACCTCT ACCTGAGCGG CTTCCTGGAT
ATGTTACACC TGTCTAAGAC CCGCAGCCTG GACAACCTAC TCGTGGGTAA GACCAGCGTG
CAATACCTGG ATCTACTCGA CGAGCTGGTG CAGCGCGACT GGCTGGTGCC GCCTAAGTAC
AACGTCATCC CGACCAGTAA CTTAGAAGAG AGCCCTAGCC TCAACTACCT GATCGAGAGC
CTGCGCAGCT AA
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| Protein sequence | MQIYSLDQML SLIKRGETFS GQLASSGCVI TIQEYLPVVC TAIHAGHNLR PELIKLCQLS
AEERYFEEDP FTDEVIASQP ITLAGSDSRF EYDLNRPKSL STYYKSAWMK QVWRKPLSAK
QRAISHAKHQ DFYRLYEALI AKLESMFGMV IVFDLHSYNY KRIEKATPVF NIGTSQIDME
RWGSVVHKFQ RELKTITLPN VEVDAELDVA FEGRGYLIAH TNARFDRTLV LPTEIKKVFM
DELTGEVYPI VLDDLKLGLK NAFSATSAYF QRKLNRQSKT RSADMLSSAI EPEVLEIDAA
LFRLAQKVDT LKYVNPTNLA AERRRFMKAP SRFKPNFAYR QLPIDANEFK YRLYRLPIDN
IADPALKQLY KDIVNKLGEQ IDLLTSVGQE GFVYNSLRYH GRPDKSAIAN AKFLLYAKEI
PEERGESLDA HQVCEMMKQS AEQWQMRCKI GLSGAIVARA MVCSNPAQLA ISTHAQFHES
EVQRLIQHEL GVHMATTLNA KQQSLKVLRL GLPGSTYTQE GLAILAELKA GFMAHSRLNT
LAARVLAVDS MLKEQDFYLT YSYLIDELEM DKDDAFMTTA RVYRGGGFTK DHLYLSGFLD
MLHLSKTRSL DNLLVGKTSV QYLDLLDELV QRDWLVPPKY NVIPTSNLEE SPSLNYLIES
LRS
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