Gene Shew_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2898 
Symbol 
ID4921359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3436624 
End bp3436983 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content43% 
IMG OID640164495 
Producthypothetical protein 
Protein accessionYP_001095023 
Protein GI127513826 
COG category[S] Function unknown 
COG ID[COG3085] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000626898 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.884869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG ATTCATTTCG TTTTGGTCAA AAGCGTTTTT TTGATGACAA AAACTTTCCC 
CGCGGCTTCA GTAAGTCCGG AGAGTTCACC TTGTCTGAAG CTGAATTGTT GAGCCTATAT
GGCGACACTA TGCAGGCCTT TGAAGCAGGC GATCTCGAGC CTGAAACTGC AGAGGAAAAA
CACTTTGTTA AGGTACTAAA ACACCCCAAC AAGGCTAATA CCAAGCTTGA GCATGTATGG
TTGAAATACA CTAAGCTTAC CCGCGAACCA AAAAAGTTCC ACACCCTAAA CAGCACGACT
AATAAGCGTG TTGAACAGTA TGAATATGTG GAATCTCCCC CAGAAGATGA GGTTGCTTAA
 
Protein sequence
MSEDSFRFGQ KRFFDDKNFP RGFSKSGEFT LSEAELLSLY GDTMQAFEAG DLEPETAEEK 
HFVKVLKHPN KANTKLEHVW LKYTKLTREP KKFHTLNSTT NKRVEQYEYV ESPPEDEVA