| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2896 |
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| Symbol | |
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| ID | 4921825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3433919 |
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| End bp | 3435430 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164493 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001095021 |
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| Protein GI | 127513824 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.634117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG AGCAGTGGAA CTCTAGGGTA GGTTTTATTT TGGCGGCAGT CGGCTCTGCC
ATCGGCCTGG GCAACATCTG GCGGTTCCCC TACATGGCCT ATGACAACGG CGGCGGTGCC
TTCTTCATCC CCTATCTGTT CGCCATGATC ACCGCCGGCA TCCCCTTTAT GATCATGGAA
TTTAGCCTGG GCCATAAGAT AAAGAAGACC TCACCGCGCA TCTTCGCCCA GCTCGGCCAC
ACCCTCGGCT TTAGACTCGA ATGGCTCGGC TGGTTTCAGG TGTTTATCGC CGCGGTGATC
GCCGTCTATT ATGTGGCCAT CATAGGCTGG ACCCTCTCCT ATCTCGGCTT CTCCTTCAGT
CAGGCCTGGG GAGACAATCC CAATGACTTC TTCTTCAATC ATTATCTTAA ACTCGGCAAC
AACTCACCCT CTCACTTGGG CGAGTTTCAA ATCGGCATAG CTATCGCCAT GAGCATCGCC
TGGCTGATGA CCTTTATGGC GGTCTTTACC GGCGTCAAAG GGGGAATCGA ACGCGCCAAC
AAGATCATGA TGCCCATGCT GTTTATCATG GTGCTGGTCC TTATTGGCCG AATAATGTTT
CTGCCCGGCG CCCTGTCGGG GCTCAACTAT TTGTTCGAGC CCGACTTTAG CCGCCTGCTG
GATGCCCAGG TCTGGTCCGC CGCCTACGGC CAGATCTTCT TCACCCTCAG CGTCGGCTTC
GCCATCATGC TCGCCTACTC AAGCTACCTG CCGACCAAGG CCGACATCAA CAACAACGCC
TTCATGACGG TACTGATCAA CTGCGGCTTC TCGATTCTGG CGGGGATTCT GATCTTCGGC
GTGCTCGGCT ATATGGCAGA GGAGCAGATG AAACCGCTGA CCGAAGTGGT CAGCTCGGGG
ATAGGCCTGG CATTTGTCAC CATACCCACG GCCATCAACC TGATGCCAGC GCCCTATATT
CTCGGGCCCC TCTTCTTCAT CGCCCTGGTG ATCGCCGGAC TGAGCTCTCA CATCTCCATC
ATAGAGGCGG TGACCAGTGC AGTGATCGAC AAGTTTCATG TGCGCCGCAA GCCCGCGGCC
GTGCTGGTGT GTAGCCTGGG CTATCTGGTC TCCATGGCCT TTGCCACCAA TGGCGGCCTG
CTGCTATTGG ACTTAGTAGA CTACTTTATT AACAATATCG CCCTGCTGCT CAGCTGCCTG
CTGGAGCTGG TGATCATCAC CTGGCTGCTC AAGGTGACGG TGATCCATCA GCATGCCAAT
GAAAATTCGG AGTTTAGGGT CGGCGGCTGG TTTGTTGTCT GTCTGCGCTT CATCAGCCCG
GCGATTCTGG CCACCATATT GGCGAAGAAT CTCTACAACA CCTTAGTCAA CGGTTATGGC
GACTACCCCA TTGCCGATCA GCTCTTCTTA GGCTGGGGCC TGGTGGGCAC CATGCTCTTC
TTTGCGGTGC TGATCAACTT CACCAGCAAG TCGCCCGGCT ATCCAGACCA ACATCCGGGA
GGTAAAACAT GA
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| Protein sequence | MKREQWNSRV GFILAAVGSA IGLGNIWRFP YMAYDNGGGA FFIPYLFAMI TAGIPFMIME
FSLGHKIKKT SPRIFAQLGH TLGFRLEWLG WFQVFIAAVI AVYYVAIIGW TLSYLGFSFS
QAWGDNPNDF FFNHYLKLGN NSPSHLGEFQ IGIAIAMSIA WLMTFMAVFT GVKGGIERAN
KIMMPMLFIM VLVLIGRIMF LPGALSGLNY LFEPDFSRLL DAQVWSAAYG QIFFTLSVGF
AIMLAYSSYL PTKADINNNA FMTVLINCGF SILAGILIFG VLGYMAEEQM KPLTEVVSSG
IGLAFVTIPT AINLMPAPYI LGPLFFIALV IAGLSSHISI IEAVTSAVID KFHVRRKPAA
VLVCSLGYLV SMAFATNGGL LLLDLVDYFI NNIALLLSCL LELVIITWLL KVTVIHQHAN
ENSEFRVGGW FVVCLRFISP AILATILAKN LYNTLVNGYG DYPIADQLFL GWGLVGTMLF
FAVLINFTSK SPGYPDQHPG GKT
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