| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2887 |
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| Symbol | |
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| ID | 4921816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3426234 |
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| End bp | 3427148 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164484 |
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| Product | sterol desaturase family protein |
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| Protein accession | YP_001095012 |
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| Protein GI | 127513815 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTA ATTCACTCAT CGCGCACCCC GAGGTGCTGT TACTCGTGCT GGCGCCGCTG
TTTTTTGTCT GTATCCTGGC CGAGTGGTAT TTTGGGGACC GTCGTGGTCG TCTGCCCGAT
AATGCCCGCT ATCATCTGCC CGAGGTGCTG TGTAACTTTA CCCTGGCGGG CCTGCATCAG
GGAGCTGATA TTCTCACCGG GTTATTGATC GCCAAGCTTT ATCTGTGGGC GTTCGACTGG
CGTCTGCTGG ATATTCAGAT GGGCCTGGGC AGCTTTATCG CACTGATTAT TGCCCAGGAC
TTCTGTTATT ACTGGTTCCA CCGCGCCAGC CACAGGGTGC GCTGGATGTG GGCGGCCCAC
GTGGCGCACC ATAGCTCGGA GCGCATGAAC TTCAGCACCG CCTTCAGGCA GAGCCTGATG
TACCCCTTTG CCGGCATGTG GATCTTCTGG CTGCCGCTGG TGGTGGTCGG CTTCGATCCT
AACTGGGTGG TGTTTGCCGT GCTGCTTAAT CTGGGACTGC AGTTTTTCGT CCATACCCAG
GCGATTAAGA CGCTGGGGCC GCTGGAGTGG GTGTTTAACA CCCCATCCCA TCACAGGGTG
CACCATGGGC GCAATCCGCA ATATATAGAT AAGAACTACG CCGGGGTGTT GATCATCTGG
GATCGCCTGT TTGGCACCTA TGTTAAGGAA GAGGAGACGG TGGAGTATGG CATCACCAAG
CCGGTGAACA GCTTTAATCC CTTGGTGGTT ACCTTTAGCG AGTGGAAGGC GATGTTTAGC
GAGGCTTTCT CGCCTGGGCT AAGCCTTAAG CAGCGCCTTG CTTTGATGTT TGCACCGCCG
GCGGCGCCTG AGCCGCAAGA TAAGATTGCC GATGCCGATG CCGATGCCGA GCCCGAGCGT
AAGCTTGCCT CATAA
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| Protein sequence | MDFNSLIAHP EVLLLVLAPL FFVCILAEWY FGDRRGRLPD NARYHLPEVL CNFTLAGLHQ
GADILTGLLI AKLYLWAFDW RLLDIQMGLG SFIALIIAQD FCYYWFHRAS HRVRWMWAAH
VAHHSSERMN FSTAFRQSLM YPFAGMWIFW LPLVVVGFDP NWVVFAVLLN LGLQFFVHTQ
AIKTLGPLEW VFNTPSHHRV HHGRNPQYID KNYAGVLIIW DRLFGTYVKE EETVEYGITK
PVNSFNPLVV TFSEWKAMFS EAFSPGLSLK QRLALMFAPP AAPEPQDKIA DADADAEPER
KLAS
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