| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2879 |
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| Symbol | |
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| ID | 4921851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3418370 |
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| End bp | 3419164 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640164476 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_001095004 |
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| Protein GI | 127513807 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.566185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAGTA ATAAAGATTC GTTCGGTAGA ACGCTGTTTG TTGTTGTTGG ATTATGTTTT
ATCTGTTCGG TATTCGTTTC TACTGCGGCC GTACTGCTTA AGCCAACTCA ACAAGAAAAC
AAATTGCTTG ATAAGCAAAA GTACATTCTT GAAGCCGCTG GCCTGGTAGA CACTAAGTCT
GGTGAAGTCA GCAAGGCTAA GATCCTTGAG ACTTACGACA AGTATGTTGA AGCTAAGCTG
GTTGACCTTA AGTCTGGTGA CTGGGTTGAA GGCAACGCCG ACACATTCGA CACAGAGAAA
GCGGCTCGCA CCCTAGAGAC CTCTTTCAAG CCTGAGCACG ACATCGCTTC AGTTAAGCGT
GTGGCGAACA AGGGCGTGGT TTACCTGGTA CGTGATGACG CTGGCACACT ACAGACAGTG
ATCATTCCGG TTAAAGGTTA CGGCCTATGG TCAACCATGT ACGCCTTCCT GGCCGTTGAG
TCTGACCTGA ACACAGTTCG CAGCTTGGTG TACTACGACT TTACCGGTTC GGGTGAAACT
CCGGGCCTAG GTGGTGAAGT TCAGAACCCT AAGTGGATCG CCAAGTGGAA GGGTAAGAAG
CTTTATGATG ACCAAGGCAA CCTGGCTATC AAAGTGACTA AGAACCCTGC CGTTGCAGAG
AGCGTTCACG GTGTTGACGC ACTATCGGGT GCAACACTGA CCAGTAATGG TGTACAGCAC
TCACTGGATT TCTGGTTGGG TAAAGAAGGT TTTGCACGTT TTCTTGAGAA GGCGCGCAAC
GGAGGACTGA GCTAA
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| Protein sequence | MASNKDSFGR TLFVVVGLCF ICSVFVSTAA VLLKPTQQEN KLLDKQKYIL EAAGLVDTKS
GEVSKAKILE TYDKYVEAKL VDLKSGDWVE GNADTFDTEK AARTLETSFK PEHDIASVKR
VANKGVVYLV RDDAGTLQTV IIPVKGYGLW STMYAFLAVE SDLNTVRSLV YYDFTGSGET
PGLGGEVQNP KWIAKWKGKK LYDDQGNLAI KVTKNPAVAE SVHGVDALSG ATLTSNGVQH
SLDFWLGKEG FARFLEKARN GGLS
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