| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2877 |
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| Symbol | |
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| ID | 4921849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3417124 |
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| End bp | 3417732 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164474 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001095002 |
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| Protein GI | 127513805 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.408197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACATT ATATTAGTCT ATTAATCCGT TCTGTTTTCA TTGAAAACAT GGCGTTATCC
TTCTTCCTTG GTATGTGTAC CTTCTTGGCT GTGTCTAAGA AAGTCACCAC GGCCATGGGC
TTAGGTGTTG CCGTAATCGT GGTATTGGCA ATTTCAGTAC CTGTTAACCA AATCATCTAT
CAGGGTATTT TGGCTCCGGG CGCCTTGGCC TGGGCTGGTG TACCCGATGC AGACCTGAGC
TTCCTTAAGT TCATCACCTT CATCGGTGTG ATCGCGGCGC TGGTTCAAAT CCTTGAGATG
GCATTGGATA AGTATTTCCC ACCGCTATAC AACGCGCTGG GGATCTTCCT ACCGCTGATC
ACAGTAAACT GTGCGATTTT CGGTGCGGTT TCTTTCATGG TTGAGCGTGA CTACAACCTG
GGTGAAAGTT TAGTGTTCGG CATAGGTTCA GGTATCGGTT GGGCACTTGC GATTGTGCTG
CTGGCCGGTA TCCGTGAGAA GTTAAAATAT GCTGATGTCC CTAATGGTCT GCGTGGTCTA
GGTATTACCT TCGTGACTGC GGGTTTGATG GCGCTAGGTT TCATGTCGTT CTCAGGTGTG
TCTCTGTAA
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| Protein sequence | MEHYISLLIR SVFIENMALS FFLGMCTFLA VSKKVTTAMG LGVAVIVVLA ISVPVNQIIY
QGILAPGALA WAGVPDADLS FLKFITFIGV IAALVQILEM ALDKYFPPLY NALGIFLPLI
TVNCAIFGAV SFMVERDYNL GESLVFGIGS GIGWALAIVL LAGIREKLKY ADVPNGLRGL
GITFVTAGLM ALGFMSFSGV SL
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