| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2876 |
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| Symbol | |
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| ID | 4921848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3415828 |
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| End bp | 3417075 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640164473 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001095001 |
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| Protein GI | 127513804 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTA TTGAATCTAC TCCAATCGAT GTATACCTCG GTGTGAGTAT GTTTACAGCC
ATCGTACTGG TCTTGGTGTT GGTGATTCTG TTCGCCAAAT CAAAACTGGT TCCGAGTGGC
GATATTACTA TCGGCATCAA CCATGATGCG GATAAAGCAA TTAAAACACC GGCGGGCGGT
AAACTATTGG GCGCTCTGGC TAGTAACGGT ATCTTCGTAT CGTCAGCCTG TGGTGGCGGT
GGTTCTTGTG GCCAGTGTAA GGTGATCGTT AAGTCTGGCG GCGGTGATAT TCTGCCAACA
GAACTCGACC ATATCTCTAA GGGCGATGCC CGTAACGGTT GTCGTCTGTC TTGTCAGGTC
AACGTTAAGT CAGATATGGA GATCGAACTG GAAGAAGAGA TCTTCGGTAT CAAGAAGTGG
GAATGCAGCG TTATCTCTAA CGATAACAAG GCGACCTTCA TTAAAGAGCT TAAGCTGGCT
ATCCCTGATG GCGAGTCTGT GCCTTTCCGT GCCGGTGGTT ACATCCAGAT CGAAGCGCCT
GCGCACCATG TTAAGTACGC CGATTTCGAC GTACCAGCAG AATACCGTGG TGACTGGGAG
CACTTTGGCT TCTTCAAGCT AGAGTCTAAG GTTGACGAAG AGACAATCCG TGCGTACTCA
ATGGCGAACT ATCCTGAAGA GGAAGGTATC ATCATGCTGA ACGTACGTAT CGCGACACCG
CCTCCACGTA ACCTGTCACT GCCTTGCGGT AAGATGTCTT CATACATCTG GAGCCTGAAG
GCTGGCGACA AGGTGACTAT CTCTGGTCCA TTCGGTGAGT TCTTCGCGAA AGACACCGAT
GCCGAGATGG TATTCATCGG TGGTGGTGCA GGTATGGCGC CTATGCGTTC ACACATCTTC
GACCAGCTCA AGCGTCTTAA GTCTAAGCGT AAGATGAGCT TCTGGTACGG TGCGCGTTCT
AAGCGTGAGA TGTTCTACGT TGAAGATTTC GACGGCCTGG CGGCTGAGAA CGATAACTTT
GTATGGCACG TGGCCCTGTC TGACCCACAA CCCGAAGATA ACTGGGATGG TTACACTGGC
TTCATCCACA ACGTATTGTA TGAAAACTAC CTACGTGACC ACGACGCGCC AGAAGATTGT
GAGTTCTACA TGTGTGGACC TCCAATGATG AACGCGGCCG TTATCGGTAT GCTTAAAGAT
CTTGGTGTTG AAGATGAAAA CATCCTGCTG GATGACTTCG GCGGCTAA
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| Protein sequence | MGIIESTPID VYLGVSMFTA IVLVLVLVIL FAKSKLVPSG DITIGINHDA DKAIKTPAGG
KLLGALASNG IFVSSACGGG GSCGQCKVIV KSGGGDILPT ELDHISKGDA RNGCRLSCQV
NVKSDMEIEL EEEIFGIKKW ECSVISNDNK ATFIKELKLA IPDGESVPFR AGGYIQIEAP
AHHVKYADFD VPAEYRGDWE HFGFFKLESK VDEETIRAYS MANYPEEEGI IMLNVRIATP
PPRNLSLPCG KMSSYIWSLK AGDKVTISGP FGEFFAKDTD AEMVFIGGGA GMAPMRSHIF
DQLKRLKSKR KMSFWYGARS KREMFYVEDF DGLAAENDNF VWHVALSDPQ PEDNWDGYTG
FIHNVLYENY LRDHDAPEDC EFYMCGPPMM NAAVIGMLKD LGVEDENILL DDFGG
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