Gene Shew_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2874 
Symbol 
ID4921846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3414314 
End bp3414538 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content53% 
IMG OID640164471 
Producthypothetical protein 
Protein accessionYP_001094999 
Protein GI127513802 
COG category[S] Function unknown 
COG ID[COG2991] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT TTTTAGCGGC TTTTGTGGTA TTACTACTGT TTTTCGTTCT TATGTCTATC 
GGCTACCTGG TGAAACAGAA GGCGGTTGCC GGCAGCTGCG GTGGTCTGGG TGCCCTGGGT
ATCGAGAAGG CCTGTGACTG TGACGACCCA TGCGATAAGC GTAAGGCGAA GATGGCCGAA
GAAGAGGCCC GTCGCGAGAA GCTGGCCAAA GATCGTATCA TCTAG
 
Protein sequence
MSTFLAAFVV LLLFFVLMSI GYLVKQKAVA GSCGGLGALG IEKACDCDDP CDKRKAKMAE 
EEARREKLAK DRII